Detailed information on CNT30674263


BLAST search results

BLAST vs Swiss-Prot:
sp|O22588|TIP32_ARATH, E-value = 3e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30722694Setaria viridisTriticum spelta27.3711.688875forward
CNT30370544Setaria viridisOryza glumipatula66.7921.6392.35183forward
CNT30576681Setaria viridisOryza barthii26.6412.5694.5273forward
CNT30583061Setaria viridisEchinochloa crusgalli28.114.198.777forward

Expression of CNT30674263

Peptides detected in this lncRNA

>peptide 1 (69 aa)
SSQPESHFMLPTLRLRETKQQCTATVTRRALRSRCWRRGRGRRTCRCTGRRCRRGLRRQAGRPSRSRCW*

Sequence

>CNT30674263
TCATCACAGCCTGAATCTCACTTTATGCTGCCAACACTACGATTGAGAGAAACCAAACAACAATGCACGGCGACGGTCACTCGGCGCGCGCTTAGAAGTC
GCTGCTGGCGACGGGGGCGTGGTCGCCGCACATGTAGATGTACCGGTAGACGATGCCGGCGAGGCCTCCGCCGACAAGCGGGCCGACCCAGTAGATCCAG
ATGTTGGTGACGATGATCTCCATCACCACGCCCTCCAACGCGCCGATGCCCGACAGGCCGTGGGTCGGGGTCGC