Detailed information on CNT3067405


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673952Leersia perrieriSetaria viridis10063.0194.2414forward
CNT30525798Leersia perrieriPhaseolus vulgaris57.9731.0991.67240reverse complement
CNT30177674Leersia perrieriSecale cereale10020.3994.69414reverse complement
CNT30291213Leersia perrieriTriticum aestivum10011.9294.44414forward
CNT30221081Leersia perrieriHordeum vulgare98.0720.0594.83406forward
CNT30384202Leersia perrieriTriticum turgidum76.5719.1495.27317reverse complement
CNT30538116Leersia perrieriBrassica napus68.3623.3592.58283forward
CNT30555411Leersia perrieriOryza glaberrima50.4851.8696.17209reverse complement
CNT30662247Leersia perrieriTriticum dicoccoides31.8838.4893.18132forward
CNT3017925Leersia perrieriZea mays10036.2895.65414forward
CNT30647597Leersia perrieriRosa chinensis75.3661.1891.03312forward
CNT30203328Leersia perrieriHelianthus annuus10050.392.75414forward
CNT30680054Leersia perrieriTriticum urartu10022.794.93414reverse complement
CNT30596724Leersia perrieriOryza meridionalis37.686.4598.72156reverse complement
CNT30371139Leersia perrieriOryza glumipatula66.1855.3593.8274reverse complement
CNT30409295Leersia perrieriPapaver somniferum10073.2792.27414forward
CNT30149641Leersia perrieriBrachypodium distachyon10020.5495.41414forward
CNT30102660Leersia perrieriOryza rufipogon77.0585.2990.91319forward
CNT30576588Leersia perrieriOryza barthii29.9528.2598.39124reverse complement
CNT30604605Leersia perrieriOryza punctata52.1793.5191.67216reverse complement

Expression of CNT3067405

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGESLTEQCRVEVEGPRVVNFFSRRRNNDVI*

>peptide 2 (34 aa)
MISSWSERMISHTGTETQPRLLQEAGNFPQWAKA*

Sequence

>CNT3067405
CTTGGGAGTAACGCGTAAGAACCTGCCCTTAGGAGGGGAACAACAACCGGAAACAATTGCTAATACCCCGTAGGCTGAGGAGCAAAAGGAGAAATCCGCC
CGAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGTTTACCAAGGCGATGATAAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGAC
TGAGACACAGCCCAGACTCCTACAGGAGGCAGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTGGAAGGCCCACGGGTCG
TCAACTTCTTTTCTCGGAGAAGAAACAATGATGTTATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGT
TATCCGGAATGATC