Detailed information on CNT30673851


BLAST search results

BLAST vs Swiss-Prot:
sp|P28551|TBB3_SOYBN, E-value = 1e-37

BLAST vs NONCODE:
NONZMAT001785, E-value = 2e-13

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30441907Setaria viridisAegilops tauschii86.769.0287.5176forward
CNT30684469Setaria viridisTriticum urartu34.9814.7387.3271reverse complement
CNT30621035Setaria viridisCajanus cajan67.4920.0384.67137forward
CNT30569889Setaria viridisVitis vinifera81.7734.8786.14166forward

Expression of CNT30673851

Peptides detected in this lncRNA

>peptide 1 (66 aa)
TRPPGRWCCKLERAEADVIESLIVEHHALIRVLNKLVHGERGVVGLHDSIRHFGRREDRECQHHPVR

Sequence

>CNT30673851
ACTCGGCCACCAGGTCGTTGGTGTTGCAAGCTTGAGCGTGCGGAAGCAGATGTCATAGAGAGCCTCATTGTCGAGCACCATGCACTCATCCGCGTTCTCA
ACAAGCTGGTGCACGGAGAGCGTGGCGTTGTAGGGCTCCACGACAGTATCAGACACTTTGGGCGACGGGAAGACAGAGAATGTCAGCATCATCCTGTCCG
GGT