Detailed information on CNT30673835


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226937Setaria viridisHordeum vulgare3234.5797.32112forward
CNT30441386Setaria viridisAegilops tauschii32.5723.7596.49114forward
CNT30606039Setaria viridisGossypium raimondii22.8616.8887.580forward
CNT3058538Setaria viridisAmborella trichopoda21.146.8686.4974forward
CNT30329187Setaria viridisDioscorea rotundata22.8620.6286.2580forward

Expression of CNT30673835

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MRRASWMSLGMMVTRLAWMAQRLVSSKSPTRLGGRLKWRREICFCG

Sequence

>CNT30673835
ACTAGCAATTCAGCAGAGCATCACAAACTTCCACTGCATTTCTGTCGATTTGACAACTGGTAGTCATAAATTCATAATTCATCGATAGCACCAGCACATT
GCAGGAACCCAATAACAACGCAACGCCTAGAAGAACACGACGACAGCAGCCTAAACACCTAGTAGCAGCAACCAAGCGCGGGAAGCGAAACGCCTAGGCG
CGCTCCCCGCGGATGCGGCGCGCGAGCTGGATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCGAAGAGCCCCA
CGAGGTTGGGCGGGCGTTTGAAATGGAGACGGGAGATTTGCTTCTGCGGC