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Detailed information on CNT3067373


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Leersia perrieriOryza sativa100.339.6798.35303reverse complement
CNT30678576Leersia perrieriSetaria viridis68.8741.1197.6208reverse complement
CNT30550263Leersia perrieriIpomoea triloba100.662.6496.38304forward
CNT30632593Leersia perrieriVigna unguiculata94.716.9497.55286forward
CNT30635645Leersia perrieriCapsicum annuum30.1314.793.4191forward
CNT30304298Leersia perrieriTriticum aestivum100.3311.4598.68303reverse complement
CNT30221494Leersia perrieriHordeum vulgare69.5416.9196.67210forward
CNT30400948Leersia perrieriTriticum turgidum100.3312.1298.35303reverse complement
CNT30569653Leersia perrieriActinidia chinensis64.5729.0694.87195reverse complement
CNT30585815Leersia perrieriMusa acuminata94.711.7892.31286forward
CNT30234810Leersia perrieriBrassica oleracea57.9523.1292175reverse complement
CNT30147390Leersia perrieriMedicago truncatula100.3339.196.7303reverse complement
CNT30440683Leersia perrieriAegilops tauschii100.3331.3798.68303forward
CNT30247816Leersia perrieriAvena sativa10014.4699.01302forward
CNT30662061Leersia perrieriTriticum dicoccoides100.3315.7998.68303reverse complement
CNT3081478Leersia perrieriBrassica juncea94.724.794.06286forward
CNT30143344Leersia perrieriLolium perenne100.3313.5498.68303reverse complement
CNT3017904Leersia perrieriZea mays100.3318.4198.68303reverse complement
CNT30229838Leersia perrieriAnanas comosus76.8252.3797.84232reverse complement
CNT30218527Leersia perrieriKalanchoe fedtschenkoi100.3320.3597.36303reverse complement
CNT30655385Leersia perrieriRosa chinensis10012.8297.35302forward
CNT30203595Leersia perrieriHelianthus annuus94.715.6197.9286forward
CNT30689128Leersia perrieriTriticum urartu94.715.3899.3286forward
CNT30595506Leersia perrieriOryza meridionalis53.6414.73100162reverse complement
CNT30369805Leersia perrieriOryza glumipatula94.3719.8796.84285forward
CNT30434589Leersia perrieriPapaver somniferum77.1531.5793.99233forward
CNT3037914Leersia perrieriCucumis melo68.549.7388.41207forward
CNT30104484Leersia perrieriOryza rufipogon59.2767.0497.77179reverse complement
CNT30575706Leersia perrieriOryza barthii100.3312.4397.03303forward
CNT30582488Leersia perrieriEchinochloa crusgalli100.3324.9698.68303forward
CNT30495774Leersia perrieriDigitaria exilis35.4327.02100107reverse complement
CNT30116696Leersia perrieriOryza nivara100.337.6498.35303reverse complement

Expression of CNT3067373

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MLSKPIHLSETEESGISCVGVKSVDLRRNAKSEGSSLGPYRRWGAKAWGANRIRYPGSPCRKR*

Sequence

>CNT3067373
CAGCCGTGGTAAGACGGGGGGCAAGTGTTCTTCGAAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTGAAAGTCGCCAAAAAGTG
GCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGTAGATCTACGAAGGAACGCCAAAAG
CGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTG
TA