Detailed information on CNT3067337


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524100Leersia perrieriSetaria italica31.9719.4394.12102forward
CNT30459528Leersia perrieriSaccharum spontaneum25.0817.069580forward
CNT30583753Leersia perrieriEchinochloa crusgalli25.0817.1796.2580forward

Expression of CNT3067337

Peptides detected in this lncRNA

>peptide 1 (52 aa)
TATTNTAKLDSRTAAGDPRRPSQTATARTATTEPPAPGLTPPAWGPRRQRRC*

>peptide 2 (87 aa)
SNHKHSQVRQSDSCRRSSTAQPDGDGKNGDDGTSCAGADTAGLGATAAATLLACCGLELLLLGTGGGRWSALALQTELNPTRMPVAR*

Sequence

>CNT3067337
ACAGCAACCACAAACACAGCCAAGTTAGACAGTCGGACAGCTGCAGGAGATCCTCGACGGCCCAGCCAGACGGCGACGGCAAGAACGGCGACGACGGAAC
CTCCTGCGCCGGGGCTGACACCGCCGGCTTGGGGGCCACGGCGGCAGCGACGCTGCTAGCCTGCTGCGGCTTGGAGTTGTTGCTCTTGGGCACGGGCGGC
GGGAGGTGGTCGGCGTTGGCGCTGCAGACGGAGCTGAACCCGACGCGGATGCCGGTGGCGAGGTAGCGCTGGTGGTTGCCGGAGAGCGTCCCGGGGACGT
GGATCGGCTCGTCGCAGTC