Detailed information on CNT30673340


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3014905Setaria viridisZea mays62.245.2490.43209forward
CNT30551919Setaria viridisOryza brachyantha61.913.3589.9208forward

Expression of CNT30673340

Peptides detected in this lncRNA

>peptide 1 (44 aa)
LHPSKKSTVQVPSYLKYIYTRAHCSINDLIAYPCTHTHVERTST*

Sequence

>CNT30673340
ACTCCATCCAAGTAAGAAATCAACAGTTCAAGTTCCAAGTTACTTGAAGTACATTTATACACGTGCTCACTGCTCAATCAACGACCTCATCGCCTACCCA
TGCACGCACACGCATGTAGAGAGGACGTCTACTTGAAGTAGTATGGGAGGTCGAGCACGTAGAGGAGGAAGTAGGCCCAGACCACGCCGGAGATGCCGCC
GAAGAAGAAGCCTCCGGTGAACTTGGCCCAGCCGCCGGGAGGTTGGAGAGGTACCAGGCGATGAGCGGGCTGGAGGTGATGGGCGTCTCCAGGCTGCCGA
TGAAGGGGTCGCCGTTGATGGGCTGCACCACCTGGT