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Detailed information on CNT30673320


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 2e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520781Setaria viridisSetaria italica73.8662.73100404forward

Expression of CNT30673320

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MPPKKKPPVNLAQPSAVCSLSASFLRPVSVSGPTRR*

Sequence

>CNT30673320
ACAAATACAACACCTAGTCATTAATTTTATCCCCAAGTAAATTAACTCCATCCAAGTAAGAAATCAACAGTTCAAGTTCCAAGTTACTTGAAGTACATTT
ATACACGTGCTCACTGCTCAATCAACGACCTCATCGCCTACCCATGCACGCACACGCATGTAGAGAGGACGTCTACTTGAAGTAGTATGGGAGGTCGAGC
ACGTAGAGGAGGAAGTAGGCCCAGACCACGCCGGAGATGCCGCCGAAGAAGAAGCCTCCGGTGAACTTGGCCCAGCCGTCGGCGGTCTGCAGCTTGTCGG
CCTCCTTCTTGCGGCCGGTGAGCGTGAGCGGGCCCACGAGGAGGTAGCCGTGCGCAAGCCCGACCTCGATGCCGCGGAGCAGCGGGCTCACGGCGGTGCG
GTAGCCATCTCGACCTCTGCCTGTCTCTCACGAACAGGGCTCTTCCTTCCTGCAAAATGGTAGAAGAGGTCTCCTTGTATCGGCCCAATTAAAGTTTGTG
ATCTTTAGATCCTGCAGGGGGTGTGTGAGAAGATCTGTGGCGTGTTT