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Detailed information on CNT30673194


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30576430Setaria viridisOryza barthii17.4322.1887.72114forward

Expression of CNT30673194

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MLTLLCRVMHSRLMLLKETLSSDASGLGMCAILSTTNSLALSIRLCFCFGSACSLAMANLALRLSLGLWIAVVAATAKRGRMAGKFLQ

>peptide 2 (34 aa)
MSLMVGSLNSPLVESGMVNLPTMGRSMVSPTWSS*

Sequence

>CNT30673194
GCTGATACAATGCAGTAGCAGTAGCATGTGGAACTGAAACAGAGGAGCTGCCTTTTATTTGCAAGATAGGATACATTCGTCGGATCAGATCACAGAGTTA
GCTCGCCTCTGATGGGGTGCGACTGAACAGCATGTCCTTGATGGTTGGGAGCTTGAACTCGCCGCTGGTGGAGAGCGGGATGGTGAACTTGCCGACGATG
GGGAGGTCGATGGTGAGCCCCACCTGGAGCTCGTAGTCGATGTCCCAGTCCCTGCCCACGTCCTTGACGATCGAGATCAGGAAGTCGTAGGGCACCTTGG
CCGGGATCTCCAGCTTGGTGCTGTCGCTGGCGGCGATCCAGCCGGGGTGACCTCGCAGATGGGGAGGCGGTGGTCGTAGGGGTTGGAGATGTTGACGTTG
CTGTGCAGGGTGATGCACTCGCGGCTCATGCTCTTGAAGGAGACGCTGTCCAGCGACGCCTCCGGCTTGGGGATGTGCGCGATCTTGTCCACCACGAACT
CCTTGGCCTTATCCATCAGGCTCTGCTTCTGCTTCGGCTCCGCGTGCTCGCTCGCCATGGCAAACCTTGCTCTTCGACTCTCTCTTGGATTATGGATCGC
GGTGGTTGCAGCAACGGCCAAACGCGGCAGGATGGCTGGGAAATTTCTGCAGAT