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Detailed information on CNT30673071


BLAST search results

BLAST vs Swiss-Prot:
sp|P05348|RBS_MAIZE, E-value = 2e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300848Setaria viridisTriticum aestivum58.9257.3281.39360forward
CNT30556975Setaria viridisPanicum hallii57.7744.1889.52353forward

Expression of CNT30673071

Peptides detected in this lncRNA

>peptide 1 (57 aa)
VKQPCYNVPTNWQSSGTLSYEYDRCVYIRVNISLCAKVFKLFIWRRRSTRCPGACRR*

Sequence

>CNT30673071
GTAAAACAACCATGTTATAATGTTCCAACGAATTGGCAATCTAGTGGTACATTGTCGTATGAATATGATCGCTGTGTATACATTCGTGTAAATATATCAC
TATGTGCAAAGGTATTTAAGCTTTTTATTTGGCGCCGCCGGTCTACTCGCTGCCCGGGGGCTTGTAGGCGATGAACATGACGCACTGCACCTGCTTGATG
TTGTCGAAGCCGATGATACGGATGTAACAGTCGGGGTAGGCCTTCTTGCACTCCTCGAACTCAGCGTACACCTGGGTGGCCTCGGTGCAGCCGAACATGG
GCAGCTTCCACATGGTCCAGTAGCGCCCGTCGTAGTAACAGGGAGACGTGCTGTTCTCACGATAGACGAACCCGATCTTGCTGAACTCAAGGCAGGGGAT
CCAGTTCTTCCGGATCAGGTAGTCGATCTGCTTCAGGACCTCGTCCGTGGAGAGAGGTGGCAGGTAGGAGAGGGTCTCGAACTTCTTGTTGCCCTCCGCC
GGCCATCACGGTCGGCGCCATGGCTTACTAGCTAGTGCTAGTATATGCTTACTACTAGTATTATTAACCAAGGAGAAGAGGAAGCAGAGCGAGGCTTGCT
TGAGTCCCTGT