Detailed information on CNT30673018


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521306Setaria viridisSetaria italica77.8745.41100366forward

Expression of CNT30673018

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MYIRTYTQDGNTKRKGINKQATLNRASNN*

>peptide 2 (43 aa)
HRYIIIRQEDEAVEELRIQYITMCMRISLAGASIHICMLLSLR*

>peptide 3 (36 aa)
MNMTHCTCLMLSKPMIRMWRRPSRWGPWLTRDQASE*

Sequence

>CNT30673018
ACATAGATATATAATTATACGTCAAGAAGATGAGGCAGTGGAGGAATTGCGTATACAATATATTACGATGTGTATGCGTATAAGTTTAGCCGGCGCTAGC
ATTCACATATGCATGCTCCTCAGCCTACGTTGATACATGTACATTCGTACATACACACAGGACGGAAACACGAAAAGAAAGGGAATTAACAAGCAGGCGA
CTTTAAACAGAGCGTCAAATAATTAAGTTGCCAAAACCGAGTAGACACTTCATCCACGGTCGCTCACGAGCGAGCGGTCCGCGCGATAAGCTTATTTGGC
GCCGCCGGTCTTACTCGGAGCCTGGGGGCTTGTAGGCGATGAACATGACGCACTGCACCTGCTTGATGTTGTCGAAGCCGATGATACGGATGTGGCGGCG
GCCATCGCGGTGGGGGCCATGGCTTACTAGAGACCAAGCTAGCGAATAAAACTGAAGCCTCAGTAGCTTG