Detailed information on CNT30673014


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 6e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520920Setaria viridisSetaria italica86.8269.41100481forward
CNT30516978Setaria viridisJuglans regia28.5223.1783.54158forward
CNT30292897Setaria viridisTriticum aestivum58.4855.0188.27324forward
CNT30438727Setaria viridisAegilops tauschii38.4567.4191.55213forward
CNT30454500Setaria viridisSaccharum spontaneum35.9254.9792.46199forward
CNT30135064Setaria viridisLolium perenne50.949.3989.72282forward
CNT3014188Setaria viridisZea mays58.4842.4194.44324forward
CNT30720963Setaria viridisTriticum spelta56.556.1988.18313forward
CNT30344813Setaria viridisEragrostis tef48.7451.6394.07270forward
CNT30620323Setaria viridisCajanus cajan39.5312.2681.28219forward
CNT30551896Setaria viridisOryza brachyantha58.348.7292.88323forward

Expression of CNT30673014

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MPPKKKPPVNLAQPSAVCSLSASFLRPVSVSVGAVDGSPSLKEATPYMVRQTLRMVTSPAAPRAPAWPCTGVLRSGPVRAKGPTRR*

Sequence

>CNT30673014
ACAAATACAACACCTAGTCATTAATTTTATCCCCAAGTAAATTAACTCCATCCAAGTAAGAAATCAACAGTTCAAGTTCCAAGTTACTTGAAGTACATTT
ATACACGTGCTCACTGCTCAATCAACGACCTCATCGCCTACCCATGCACGCACACGCATGTAGAGAGGACGTCTACTTGAAGTAGTATGGGAGGTCGAGC
ACGTAGAGGAGGAAGTAGGCCCAGACCACGCCGGAGATGCCGCCGAAGAAGAAGCCTCCGGTGAACTTGGCCCAGCCGTCGGCGGTCTGCAGCTTGTCGG
CCTCCTTCTTGCGGCCGGTGAGCGTGAGCGTGGGCGCCGTGGACGGGTCGCCCTCGTTGAAGGAGGCGACGCCGTACATGGTGAGGCAGACGCTGAGGAT
GGTGACGAGCCCGGCGGCGCCCAGGGCGCCCGCCTGGCCGTGCACGGGCGTGTTGCGGAGCGGGCCGGTGAGGGCGAAGGGGCCCACGAGGAGGTGATGG
GCGTCTCCAGGCTGCCGATGAAGGGGTCGCCGTTGATGGGCTGCACCACCTGGT