Detailed information on CNT30672983


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30292293Setaria viridisTriticum aestivum19.2236.4885.3989forward
CNT30582613Setaria viridisEchinochloa crusgalli31.753093.88147forward
CNT30115596Setaria viridisOryza nivara27.866084.5129forward

Expression of CNT30672983

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MAFTVKRGRLVSAAPERPLGLECTKPLFITWLAMGAYAVAISTSACLSRTGLFLPAKW*

Sequence

>CNT30672983
ACAAATACAACACCTAGTCATTAATTTTATCCCCAAGTAAATTAACTCCATCCAAGTAAGAAATCAACAGTTCAAGTTCCAAGTTACTTGAAGTACATTT
ATACACGTGCTCACTGCTCAATCAACGACCTCATCGCCTACCCATGCACGCACACGCATGTAGAGAGGACGTCTACTTGAAGTAGTATGGGAGGCCGGGA
GGCTGGATGGCCTTCACGGTGAAGCGGGGCCGCCTGGTCAGCGCAGCGCCTGAAAGGCCCCTGGGCCTCGAGTGCACCAAGCCGCTCTTCATCACCTGGC
TCGCCATGGGAGCGTACGCGGTAGCCATCTCGACCTCTGCCTGTCTCTCACGAACAGGGCTCTTCCTTCCTGCAAAATGGTAGAAGAGGTCTCCTTGTAT
CGGCCCAATTAAAGTTTGTGATCTTTAGATCCTGCAGGGGGTGTGTGAGAAGATCTGTGGCGT