Detailed information on CNT30672918


BLAST search results

BLAST vs Swiss-Prot:
sp|P05348|RBS_MAIZE, E-value = 1e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30582550Setaria viridisEchinochloa crusgalli38.4120.2287.3126forward

Expression of CNT30672918

Peptides detected in this lncRNA

>peptide 1 (83 aa)
SLSILNAYLAPPVLLGAWGLVGDEHDALHLLDVVEADDTDVTVGVGLLALLELSVHLGGLDEPDLAELEAGNPVLPDQVVDLL*

Sequence

>CNT30672918
GAGTCTCAGTATTTTAAATGCTTATTTGGCGCCGCCGGTCTTACTCGGAGCCTGGGGGCTTGTAGGCGATGAACATGACGCACTGCACCTGCTTGATGTT
GTCGAAGCCGATGATACGGATGTAACAGTCGGGGTAGGCCTTCTTGCACTCCTCGAACTCAGCGTACACCTGGGTGGCCTCGACGAACCCGATCTTGCTG
AACTCGAGGCAGGGAATCCAGTTCTTCCGGATCAGGTAGTCGATCTGCTTTAGGACCTCGTCCGTGGAGAGAGGTGGCAGGTAGGAGAGGGTCTCGAACT
TCTTGTTGCCCTCCGCCGGCCACACCTG