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Detailed information on CNT30672815


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693247Setaria viridisOryza sativa25.8112.3993.1888forward
CNT30553602Setaria viridisOryza glaberrima25.8118.9793.1888forward
CNT30101150Setaria viridisOryza rufipogon25.8113.593.1888forward

Expression of CNT30672815

Peptides detected in this lncRNA

>peptide 1 (89 aa)
KSNNEAKAPLLDGDTSVHRIGTLLQARKCQQSQASPTSFSLISQSFLAFSGSLASCESCMLQILLSLYALAPSKLSEPSIMADPFWPRS*

>peptide 2 (41 aa)
TNQTMKQKLLCSTETRASTVLARSSKLESVSNLRRVRRASR*

Sequence

>CNT30672815
ACAAATCAAACAATGAAGCAAAAGCTCCTCTGCTCGACGGAGACACGAGCGTCCACCGTATTGGCACGCTCCTCCAAGCTAGAAAGTGTCAGCAATCTCA
GGCGAGTCCGACGAGCTTCTCGCTGATCTCCCAGAGCTTCCTCGCCTTCTCCGGGTCGCTGGCCTCCTGCGAGAGCTGCATGTTGCAGATCTTGCTGTCC
TTGTACGCCTTGGCGCCGTCGAAGCTCTCGGAGCCGTCGATCATGGCGGACCCGTTCTGGCCGCGCAGCTAAGCTGAGTTCAGCTGAGCGACAGCGAGAC
GCGCTGTTGTTTGCGGCGCGGTGACTGTGCTCGGAGGTGGT