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Detailed information on CNT30672689


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521132Setaria viridisSetaria italica53.1244.899.67306forward

Expression of CNT30672689

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MAIPRPCLGSRGSRLSELEGDGEGVGTADAEDVQLHRRTTDVRETGGYTWGRRQGSPDLQRRDRPTRIRKT*

>peptide 2 (68 aa)
MRRTCSFIGGRRTLEKLVGIHGGGGRVPRIYKGGTGQLEFEKPKGAVCKSFFREEETTLKEKKLRGPE*

Sequence

>CNT30672689
CCATTGGAGCACATTGCTACAAATTGCAATCACAAGTTCAGATCCACAAACTGATTATTACTAATTGTCTAGATTAATATAACACAGCAAACCATGATTA
AGAACATAAGCAGCCAAGCTGCAGCGACACAACCACAAACTAGTACATGAGCTTAGCAGTAGTAATCATAGCAGTAGGTGACCATGGCAATCCCACGGCC
ATGTCTTGGTAGTCGAGGCAGCCGGCTCTCAGAACTGGAAGGCGACGGAGAAGGAGTGGGAACGGCGGATGCGGAGGACGTGCAGCTTCATCGGAGGACG
ACGGACGTTAGAGAAACTGGTGGGTATACATGGGGGCGGCGGCAGGGTTCCCCGGATCTACAAAGGAGGGACCGGCCAACTAGAATTCGAAAAACCTAAG
GGGGCTGTCTGCAAGAGTTTCTTCAGGGAGGAGGAGACGACTCTGAAGGAGAAGAAACTACGAGGACCTGAGTGAAAGAAAAGAAAGGGAGCAGGGACTT
AGCTCAAAGAGAAGAAGGCCTGGGCGACCGGGGGCTCTATTGCTTATAGCACCAGAAAGCTTGCGGAAATGGGGAA