Detailed information on CNT30672625


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0DKY4|METK1_ORYSJ, E-value = 4e-61

BLAST vs NONCODE:
NONORUT006297, E-value = 2e-48

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30266730Setaria viridisChenopodium quinoa88.4624.6486.59276forward

Expression of CNT30672625

Peptides detected in this lncRNA

>peptide 1 (30 aa)
QDRKQQWSASSPTSADTKPMLRQVSLTIFS*

>peptide 2 (59 aa)
MTMLVLVQVSQATLLSGSSARQASSTASETWSQSLSGCPSFTDSEVKRKVSTAAIFSDLQ

Sequence

>CNT30672625
GACAAGATAGAAAGCAGCAGTGGTCAGCGTCAAGCCCGACATCTGCCGACACGAAACCGATGTTGCGGCAAGTGTCCCTGACAATCTTCTCGTAGTCGAC
GTTGGCCTTGGTGGTGATCTCACCAAAGACCATGACCATGTTAGTCTTGGTGCAGGTCTCGCAAGCAACCTTGCTGTCGGGGTCCTCAGCAAGGCAAGCA
TCAAGCACAGCATCTGAGACCTGGTCGCAGAGCTTGTCAGGGTGTCCCTCATTCACGGACTCCGAGGTGAAGAGGAAGGTGTCGACTGCGGCCATCTTTT
CTGATCTGCAGC