Detailed information on CNT30672538


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30464486Setaria viridisSaccharum spontaneum42.3827.6288.18203forward
CNT30101510Setaria viridisOryza rufipogon40.518.690.72194forward
CNT30576205Setaria viridisOryza barthii40.519.6490.72194forward

Expression of CNT30672538

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MRTRTPAKTRREMRMLHRQLKSPQARHLQGQQRHETARLADPIFFFFFFFLLLCSCCALGIGRRTMGKESDGI

Sequence

>CNT30672538
CCATGGATCGGATAGGCTAATATGTGCATATCCATGGTAGAGCAGCCGGCGATGTACAGCAACAAATAATCCTCCCACCAGTCTCACCAACAAATAATCC
AAGACGAAGAACAGACAGAATCCATACTAGCTAGCAGCAGAATAATCCAACAACATCCTCTACCAGAGTTTGCAGTCGGTGGGCGAGAGGGTGAAGGTGG
CGAGGGAGGCGGAGTCGACGGTGGCGGCGATCATGTGGGGGCGGAAGATGAGGTAGAGGATGAGGACGAGGACGCCGGCGAAGACGAGGAGGGAGATGAG
GATGCTGCACAGGCAGCTGAAGAGCCCGCAGGCCAGGCACTTGCAGGGGCAGCAGAGGCACGAGACGGCGCGGCTCGCGGACCCCATCTTCTTCTTCTTC
TTCTTCTTCTTGCTGCTCTGCTCTTGTTGTGCTCTCGGGATTGGGAGGAGGACGATGGGGAAGGAATCCGATGGGATTT