Detailed information on CNT30672463


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693623Setaria viridisOryza sativa22.8914.891.89111forward
CNT30520893Setaria viridisSetaria italica51.5568.49100250forward
CNT30367620Setaria viridisSorghum bicolor22.4728.3196.33109forward
CNT30496965Setaria viridisDigitaria exilis32.3746.1896.82157forward

Expression of CNT30672463

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MELPPRPFTATGCTETAAREAMAFAEYCRGYYR*

Sequence

>CNT30672463
GGCACGCAGCACCAATTTTAATTGTATATGCCGGAGTACAATATCAACATCGATAAAAAGAGGCAGCGATCGAATATCAACAGGATAACAGGCAGAGATC
CATGGTGATGATCGGAGCTAGCAGTACAAGCAAAGCTAGTAGGCGAATGGAGGAGGATCGGAGGAGCAACTGAACTTAGATCTTGCCGCGCGGGCCCGGC
ACCGGCGGCTGCTGCGGCCCCTTCTTGATCGGCAGGAGGTCGAAGTAGACGCTCTTGTCGCCGTACTTGGCCACCACGGCGGCGCGGGGCGCCGGCCTGA
CGGCGAGCCTCCTGCCGGAGATGGAGCTGCCGCCGAGGCCCTTCACGGCGACCGGCTGCACGGAGACGGCGGCGAGGGAGGCCATGGCGTTCGCTGAGTA
CTGTCGAGGTTACTACCGGTAGTGTCCAAGTGCGTACGTGCGCAAACTTAATTCGGCGGATCGTGCTAAGGATCCGAGACGTGTG