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Detailed information on CNT30672261


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520507Setaria viridisSetaria italica66.9930.6999.43349forward
CNT30450081Setaria viridisSaccharum spontaneum70.6315.9385.05368forward
CNT30580794Setaria viridisEchinochloa crusgalli73.5122.886.95383forward
CNT30496207Setaria viridisDigitaria exilis73.1317.1389.24381forward

Expression of CNT30672261

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDGDWVGGFWLWTSGDGMAGGGLGVLESPPC

Sequence

>CNT30672261
CGTTAAGCTTCTGCTGCTACTTTAGTAGTAGACCTGAAGAAAACTCTTTTTTTGTTTTTTTTTCTTTCTAGCAAACCAAGAACAAATCAGGCAGAACCCA
ACAGCCACAGTAAAAAACAGATGGCTCTGATGGTAGATCTGCGCACGGACTTGCACAAGGGAGGTGTGGAAAAAGAACCCCTCTTGGCTACCAAACTAGC
AACCTAGACTGCTAAAAACCAAGCTGAAGAAGAAATAGCAGATCTGAAGCCCAGGATCTAAAACGTCCCGGGTCTCTCGCTGTCTGCTCGAGGAAGACGA
AACCAAGAAGAACAAGGAGAGGAGGAAGAGGGTCAGGAGAGTGAACTTTACCTGCGACGCGCGAGAACTCGCTCAGATCTAAGCTTACCTCGCTCGAACT
CACTGGAACGGTGGTGGGTGGGCGCTGGATGGATGGGGATTGGGTAGGCGGATTTTGGCTGTGGACGAGCGGAGATGGGATGGCTGGTGGTGGCTTGGGA
GTGTTGGAATCGCCCCCATGT