Detailed information on CNT30672164


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 8e-20

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378673Setaria viridisArabidopsis thaliana72.0848.0496.16599reverse complement
CNT30490123Setaria viridisOlea europaea32.2515.3995.15268forward
CNT30162096Setaria viridisPistacia vera15.0442.0998.4125reverse complement
CNT3089926Setaria viridisSolanum tuberosum42.2415.8795.73351reverse complement
CNT30219690Setaria viridisHordeum vulgare71.7287.0197.32596reverse complement
CNT30600960Setaria viridisFraxinus excelsior20.9419.2782.76174forward
CNT30715685Setaria viridisMalus domestica golden54.6337.383.04454reverse complement
CNT30346086Setaria viridisEragrostis tef87.9796.4499.18731forward
CNT30359771Setaria viridisLactuca sativa75.8160.2995.87630forward
CNT30331625Setaria viridisDioscorea rotundata28.1673.5895.3234forward
CNT3039925Setaria viridisMarchantia polymorpha39.4766.1392.99328forward

Expression of CNT30672164

Peptides detected in this lncRNA

>peptide 1 (83 aa)
RRAKTFSFEARDDHFLAGADTDRLSKKTLKWANTRPSGRTCRLRLRAPADTFRSTFTCEPKSSCRTPSFLISVLAFFIFRRGL*

Sequence

>CNT30672164
ACGGAGGGCTAAAACCTTTAGTTTTGAAGCAAGGGATGACCATTTTCTTGCTGGGGCGGACACGGATCGACTCTCTAAGAAGACTCTGAAGTGGGCGAAC
ACTCGGCCCAGCGGGCGAACATGCCGGCTCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCACGTGTGAACCGAAGTCGTCTTGCCGAACTC
CTTCCTTTCTCATTTCAGTCCTCGCCTTTTTCATCTTCCGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGAGGTCGCGAGAGAGCAGAGCGTACCGCCCT
GCCATAGTCGCGAGGATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGACGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCT
CCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCAAAGGAACTCGGCAAAATGACC
CCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAAGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTA
AGTGGTAACACGATGTATAGAGTCTGACACCTACCCGGTGCTGGAAAGTCGGAAGGAAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAG
TAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGG
TGAAATTGAATTCTCCGTGAAGATGCGGAGT