Detailed information on CNT30671792


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30179479Setaria viridisSecale cereale25.4512.2887.0685forward
CNT30112169Setaria viridisFicus carica21.864.3589.0473forward

Expression of CNT30671792

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MCTSECINSSLVHILQITSPHQQALLINETSINKLSDPSSHHTLSLITK*

>peptide 2 (53 aa)
MGSGPASPARTAGTPRASRARTGRTRSRPPVTRRGSRAPPRRGTRAAGGGGVWR

>peptide 3 (31 aa)
MISRTHGFWSSESSSNCRYSTGFPSPNGSNP*

Sequence

>CNT30671792
TAATTCAAGATGTGTACAAGTGAATGCATTAATTCATCACTGGTTCATATATTACAAATCACAAGTCCCCATCAGCAAGCTCTCCTAATTAACGAGACCT
CCATTAACAAACTATCGGATCCATCTTCCCACCATACCCTCTCACTCATCACAAAATGATATCACGCACGCATGGGTTCTGGTCCAGCGAGTCCAGCTCG
AACTGCAGGTACTCCACGGGCTTCCCGAGCCCGAACGGGTCGAACCCGTAGTCGCCCACCAGTGACCCGTCGAGGTAGTCGGGCGCCACCGCGCCGGGGA
ACCAGAGCGGCCGGTGGTGGTGGTGTGTGGCGTG