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Detailed information on CNT3067156


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692428Leersia perrieriOryza sativa66.5420.296.09179forward
CNT30639906Leersia perrieriNymphaea colorata64.3112.0686.13173forward
CNT3070001Leersia perrieriQuercus suber22.311.4786.6760forward
CNT30524833Leersia perrieriPhaseolus vulgaris65.4311.6386.93176forward
CNT3042646Leersia perrieriPrunus dulcis45.3521.0389.34122forward
CNT30589303Leersia perrieriMusa acuminata81.0429.787.61218forward
CNT30553208Leersia perrieriOryza glaberrima25.657.6397.169forward
CNT30448528Leersia perrieriSaccharum spontaneum34.575.9993.5593forward
CNT30684140Leersia perrieriTriticum urartu73.6129.4291.92198forward
CNT30361799Leersia perrieriSorghum bicolor70.2619.8392.06189forward
CNT30596039Leersia perrieriOryza meridionalis25.6526.3497.169forward
CNT30641906Leersia perrieriCannabis sativa31.979.7384.8886forward
CNT30147849Leersia perrieriBrachypodium distachyon27.8817.019275forward
CNT30100699Leersia perrieriOryza rufipogon66.5416.2796.09179forward
CNT30579178Leersia perrieriEchinochloa crusgalli71.3815.6792.71192forward
CNT30116140Leersia perrieriOryza nivara78.0727.2495.71210forward
CNT30603857Leersia perrieriOryza punctata66.5420.5794.41179forward

Expression of CNT3067156

Peptides detected in this lncRNA

>peptide 1 (44 aa)
GRGADEDEFGEEIGAADGGSRGWRGGRRRRRRGCRSGGSRSGRG*

>peptide 2 (88 aa)
GEAPMRMSLAKRSGRRMEGVEDGEEVVDVGVEVVVAAEVEVVGVDAAGADEVVEDDAVVARQVRQHAAPRRLVRPEPVRQHHHPLPAPH

Sequence

>CNT3067156
GGGGAGAGGCGCCGATGAGGATGAGTTTGGCGAAGAGATCGGGGCGGCGGATGGAGGGAGTCGAGGATGGAGAGGAGGTCGTCGACGTAGGCGTCGAGGT
TGTCGTAGCGGCGGAAGTCGAAGTGGTCGGGGTTGACGCTGCCGGCGCAGACGAGGTCGTAGAGGACGACGCGGTGGTCGCGCGTCAGGTACGGCAGCAC
GCGGCTCCACGCCGACTGGTCCGTCCCGAACCCGTGCGACAGCACCACCACCCGCTCCCCGCTCCCCAC