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Detailed information on CNT30671460


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520562Setaria viridisSetaria italica43.2139.0699.43175forward

Expression of CNT30671460

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MIWSSAPVFLSPSTMPTPMMWPTAPQASAMATPVVSRLRAAALFTELNVWVFSGGVAVYGRCVS*

>peptide 2 (66 aa)
FLKICSMKKKVRTTWVTEADRLWGQKQQQAMFIGTRRCMRAQRMHTHAGYIGGGASDRQPNKHFSR*

Sequence

>CNT30671460
GTTTCTGAAGATTTGTTCCATGAAAAAAAAAGTACGAACGACGTGGGTTACTGAAGCTGATAGGCTCTGGGGCCAAAAGCAGCAACAAGCTATGTTCATT
GGGACGAGACGATGCATGCGCGCACAACGAATGCACACGCACGCAGGTTACATAGGCGGCGGCGCGAGCGATAGGCAGCCAAACAAACACTTCAGCCGAT
GATCTGGTCGAGCGCGCCGGTGTTCTTGAGCCCGAGCACGATGCCGACGCCGATGATGTGGCCGACGGCGCCGCAGGCCAGCGCCATGGCGACACCTGTT
GTCTCTCGTCTGCGTGCTGCTGCTCTGTTCACCGAACTGAACGTGTGGGTATTTTCAGGGGGCGTGGCGGTTTATGGACGCTGCGTGTCTTAAAGCTTTG
GACGT