Detailed information on CNT30671331


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519888Setaria viridisSetaria italica65.822.29100152forward

Expression of CNT30671331

Peptides detected in this lncRNA

>peptide 1 (75 aa)
RKEEEQHNSKQANSSPCLSKFLPSLHPCHCTPEAIYTSHRRGHDYSIRTARDGASCVAMLRPRRPRGGNAQNLVSF

>peptide 2 (43 aa)
TEGGRAAQQQASKQLAMPFQVPTLFASLSLHAGSNIHKPPPRP*

>peptide 3 (46 aa)
GRRKSSTTASKQTARHAFPSSYPLCIPVTARRKQYTQATAAAMIIL*

Sequence

>CNT30671331
ACGGAAGGAGGAAGAGCAGCACAACAGCAAGCAAGCAAACAGCTCGCCATGCCTTTCCAAGTTCCTACCCTCTTTGCATCCCTGTCACTGCACGCCGGAA
GCAATATACACAAGCCACCGCCGCGGCCATGATTATTCTATAAGAACGGCGCGGGACGGTGCGAGTTGCGTAGCAATGCTTCGCCCCCGGCGACCGCGAG
GTGGAAATGCTCAGAATTTAGTGAGTTTTGC