Detailed information on CNT30671211


BLAST search results

BLAST vs Swiss-Prot:
sp|P32112|SAHH_WHEAT, E-value = 1e-26

BLAST vs NONCODE:
NONGMAT001730, E-value = 5e-29

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639595Setaria viridisNymphaea colorata63.5128.3984.33134forward
CNT30628366Setaria viridisVigna unguiculata61.149.0387.6129forward
CNT30221157Setaria viridisHordeum vulgare33.1833.3391.4370forward
CNT30365573Setaria viridisSorghum bicolor45.527.294.7996forward
CNT30354796Setaria viridisLactuca sativa54.0321.6782.46114forward
CNT30329937Setaria viridisDioscorea rotundata55.4511.2983.76117forward
CNT30103950Setaria viridisOryza rufipogon72.9945.0394.16154forward

Expression of CNT30671211

Peptides detected in this lncRNA

>peptide 1 (69 aa)
LLGVRLEPVADDGEHDLELGVVGGLRVGDLAGLLILLLGLDALVDEEGGVTTVLADWIWEGIGGGEETAG

>peptide 2 (68 aa)
FLGSDLSPSRMMVSTILNSALSVDSGSGILPDFSYSSSALTPSWMRRVASPPSSRIGSGRESEEGRRRL

Sequence

>CNT30671211
ACTTCTTGGGGTCAGACTTGAGCCCGTCGCGGATGATGGTGAGCACGATCTTGAACTCGGCGTTGTCGGTGGACTCCGGGTCGGGGATCTTGCCGGACTT
CTCATACTCCTCCTCGGCCTTGACGCCCTCGTGGATGAGGAGGGTGGCGTCACCACCGTCCTCGCGGATTGGATCTGGGAGGGAATCGGAGGAGGGGAGG
AGACGGCTGGC