Detailed information on CNT30671097


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691021Setaria viridisOryza sativa39.4853.6986.26182forward
CNT30100563Setaria viridisOryza rufipogon45.1222.2787.02208forward

Expression of CNT30671097

Peptides detected in this lncRNA

>peptide 1 (63 aa)
PAQHTINDSTRRDSEITVILFIAKRERMGGGGTEGYNQYRTRRRGMEGGSTSRSRRAGRSLRS*

>peptide 2 (73 aa)
HQHSTRLTTRHDAIQRSPSSYSSRSGSGWEEGGRRDTINTGLDDGGWRAAAPADLGELAAVCDLDGLGGGAAA*

>peptide 3 (74 aa)
MALTTSRPSTTCPKTTCLPSSQGQGTVQMKNWEPLVLGPALAMGGEAVGIEEEGFRDLLGQKEILWLWLMLWGCL

Sequence

>CNT30671097
CACCAGCACAGCACACGATTAACGACTCGACACGACGCGATTCAGAGATCACCGTCATCTTATTCATCGCGAAGCGGGAGCGGATGGGAGGAGGGGGGAC
GGAGGGATACAATCAATACAGGACTCGACGACGGGGGATGGAGGGCGGCAGCACCAGCAGATCTAGGCGAGCTGGCCGCAGTCTGCGATCTTGACGGCCT
TGGCGGTGGTGCCGCTGCGTGACCCGACCTTCTCGATGGCCTTGACGACGTCGAGGCCATCGACGACCTGCCCGAAGACGACGTGCTTGCCGTCGAGCCA
GGGGCAGGGCACGGTGCAGATGAAGAACTGGGAGCCGTTGGTGTTGGGCCCGGCGTTGGCCATGGGTGGGGAGGCGGTGGGGATCGAGGAGGAGGGGTTT
AGGGATTTGTTGGGGCAGAAGGAAATCCTCTGGCTTTGGTTGATGCTGTGGGGATGTCTGT