Detailed information on CNT30671041


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30569495Setaria viridisActinidia chinensis2012.984.9373forward
CNT3084160Setaria viridisVigna radiata208.584.9373forward
CNT30369645Setaria viridisOryza glumipatula35.3425.4487.6129forward
CNT30550616Setaria viridisOryza brachyantha26.8516.3986.7398forward

Expression of CNT30671041

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MALTTFMPSTTWPKTTCLPWSPCSGAACRSS

>peptide 2 (37 aa)
MEGTDTADSTTTTTEGGRPGRQIRSERSRRAGRSRRS*

Sequence

>CNT30671041
ACCTAAACCCCTAATTAAACCACCACGGAGGGACACGAACACATGATAAACGACTAGACACGACTCAACTCAGACCACCTCTCAGATCACCATCATCTTA
TTCAGATCGAAGCTAATGGAAGGGACGGACACGGCGGACTCGACGACGACGACGACGGAGGGAGGGCGGCCGGGTAGGCAGATCAGATCTGAGAGATCTA
GGAGAGCTGGCCGCAGTCGGCGATCTTGACTTCCTTGGCGGTGGATCCGCTGCGGGAGCCCACCTTCTCGATGGCCTTGACGACGTTCATGCCCTCGACG
ACCTGGCCGAAGACGACGTGCTTGCCGTGGAGCCCTTGTAGTGGAGCGGCTTGCCGCTCTTCCCG