Detailed information on CNT30670881


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689863Setaria viridisOryza sativa49.762.2490.48105forward
CNT30554184Setaria viridisOryza glaberrima60.6611.9986.72128reverse complement
CNT30467258Setaria viridisSaccharum spontaneum53.0813.6687.5112forward
CNT30371309Setaria viridisOryza glumipatula46.9210.5484.8599forward
CNT30109604Setaria viridisOryza longistaminata43.137.0490.1191reverse complement
CNT30103117Setaria viridisOryza rufipogon60.663.5686.72128reverse complement
CNT30576920Setaria viridisOryza barthii71.563.5586.09151forward
CNT30497423Setaria viridisDigitaria exilis41.238.5187.3687forward
CNT30117547Setaria viridisOryza nivara30.331.3192.1964forward
CNT30550395Setaria viridisOryza brachyantha20.8511.2297.7344forward

Expression of CNT30670881

Peptides detected in this lncRNA

>peptide 1 (44 aa)
IHEVNLLSLINPSLANSYCSTTLSNHGLIRFNRFVSRIRLHLCN*

Sequence

>CNT30670881
TAATTCACGAGGTGAATCTATTAAGCCTAATTAATCCGTCATTAGCAAATAGTTACTGTAGCACCACATTGTCAAATCATGGACTAATTAGGTTTAATAG
ATTCGTCTCGCGAATTAGACTCCATCTGTGTAATTAGTTTTGTGATTAACCTATATTTAATACTCTTAATTAGCATCCAAACATCCGATGTGACAGGTGC
TAAACTTTAGT