Detailed information on CNT30670851


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SK39|SBP3_ARATH, E-value = 2e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30442397Setaria viridisAegilops tauschii62.1912.6190.4125forward
CNT30667282Setaria viridisTriticum dicoccoides62.1928.0990.4125forward
CNT30686589Setaria viridisTriticum urartu62.1912.7689.6125forward
CNT30100392Setaria viridisOryza rufipogon10037.7893.53201forward

Expression of CNT30670851

Peptides detected in this lncRNA

>peptide 1 (33 aa)
LAWNLVSQSARTPSSFSVRPERARLASRPAKMA*

>peptide 2 (65 aa)
LGLELGLPVSEDAELLLGEAGEGAAGLAAGEDGVGAAGPVEATAGGDVVDLAADGDVDRLGRVGAV

Sequence

>CNT30670851
ACTTGGCCTGGAACTTGGTCTCCCAGTCAGCGAGGACGCCGAGCTCCTTCTCGGTGAGGCCGGAGAGGGCGCGGCTGGCCTCGCGGCCGGCGAAGATGGC
GTAGGCGCCGCCGGGCCCGTAGAAGCTACGGCCGGAGGTGACGTCGTAGACCTTGCCGCGGATGGAGACGTAGATCGGCTTGGACGGGTCGGTGCCGTCG
T