Detailed information on CNT3067083


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 8e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3070976Leersia perrieriQuercus suber42.7131.6986.96161forward
CNT30148203Leersia perrieriBrachypodium distachyon43.2427.6387.73163forward
CNT30499073Leersia perrieriDigitaria exilis46.9523.7691.53177forward

Expression of CNT3067083

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MGPFPVTMACTKNPNMENMARRPFLSSFTLSSAN

>peptide 2 (40 aa)
MHYWRRGQQHGRTGSRWVPSPSRWPARRTQTWRTWRDAHS*

>peptide 3 (39 aa)
MVEQVLDGSLPRHDGLHEEPKHGEHGETPILELLHLELRE

Sequence

>CNT3067083
CTGATTTCAATACTTTAAACGTGATGGTGAATTCGTGATTCGTTTCGCATCTTTTGTTATCCTGGAACAATATATTTAAGATCCTATATAATGAAAGGCT
CGGCTATAACTGGTGGCGTTTGACTACTAAGGTACATCATTGAATTCATCCCTTCGTTCCATCAAGGTCTGCCGCTATCTATACACGCACGCTCACTTGC
CGGGGACGAAGTTGGTGGCGTAAGCCCATGCATTATTGGCGACGGGGTCAGCAACATGGTCGAACAGGTTCTCGATGGGTCCCTTCCCCGTCACGATGGC
CTGCACGAAGAACCCAAACATGGAGAACATGGCGAGACGCCCATTCTTGAGCTCCTTCACCTTGAGCTCCGCGAACG