Detailed information on CNT30670726


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691003Setaria viridisOryza sativa50.6423.889.21278forward
CNT30364686Setaria viridisSorghum bicolor43.931.1494.19241forward
CNT30100297Setaria viridisOryza rufipogon70.6729.4290.21388forward
CNT30575416Setaria viridisOryza barthii70.6745.2289.95388forward

Expression of CNT30670726

Peptides detected in this lncRNA

>peptide 1 (54 aa)
NVTKYADSLDEKSAILQFHMSNPKTQSIITATEHFAESKQGKFSWWICHIQFTQ*

>peptide 2 (48 aa)
MPRRGRRPWRAAEAGKEGRRGAAGGGDYLGGGVDRERRGRVGVCAAYLE

>peptide 3 (41 aa)
MVDMPYPVYSMILLMTPAPTVLPPSRIANLIPCSQATGWMS*

Sequence

>CNT30670726
TGAATGTCACAAAGTATGCAGATTCACTTGACGAAAAAAGTGCCATACTACAATTTCACATGAGCAACCCTAAAACTCAAAGCATAATAACAGCTACGGA
GCATTTCGCTGAGAGTAAACAAGGAAAATTCTCATGGTGGATATGCCATATCCAGTTTACTCAATGATTTTGTTGATGACACCAGCACCAACGGTCTTAC
CACCCTCACGGATAGCAAACCTCATTCCCTGCTCACAAGCGACGGGCTGGATGAGCTGAACAATCATCTTGATACGGTCACCAGGCATGCACATCTTCGC
CTCCTCATCCTTGTCATTCATAATCGTTGTCACACTCCCTGTCACGTCAGTTGTCCGCATGTAGAACTGAGGGCGGTAACCAGGGAAGAAAGGCGAGTGG
ATGCCGAGGCGAGGGAGGAGGCCATGGCGGGCGGCGGAGGCTGGGAAGGAGGGGAGGCGCGGAGCAGCGGGAGGTGGGGATTATTTGGGGGGTGGTGTGG
ATAGGGAGAGGCGAGGGAGGGTAGGGGTTTGCGCTGCTTATCTAGAAGC