Detailed information on CNT30670523


BLAST search results

BLAST vs Swiss-Prot:
sp|P32112|SAHH_WHEAT, E-value = 3e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702258Setaria viridisQuercus lobata45.134.2686.34161forward
CNT3020599Setaria viridisCitrullus lanatus53.2216.5187.37190forward
CNT30380073Setaria viridisManihot esculenta42.314.6389.4151forward
CNT30505192Setaria viridisNicotiana attenuata48.7430.882.76174forward
CNT3076639Setaria viridisBrassica juncea41.7423.3282.55149forward
CNT30720770Setaria viridisTriticum spelta48.4628.8392.49173forward
CNT30705212Setaria viridisPrunus avium54.3452.7285.05194forward
CNT30723271Setaria viridisLupinus angustifolius56.8677.1985.22203forward

Expression of CNT30670523

Peptides detected in this lncRNA

>peptide 1 (33 aa)
PVVSRLVGTLNRDTDVVSLRLAELGEPGTKLAQ*

Sequence

>CNT30670523
ACCGGTAGTGAGCAGGCTTGTAGGGACCCTCAATCGGGACACTGATGTAGTCAGCCTGAGACTTGCTGAGCTTGGTGAGCCTGGCACCAAGCTTGCCCAA
TGAATGAGCAGGACATGACAAAGCTGGGGTGGCCAGTAGCGCACCCAAGGTAAGGACCTGAAGACCCTCCATCAGGGCCTGAAGGGCACAGATGGGGTCG
ATCTCAGTCACGATGACACGGGCACCAGCCTGCTTGAGGGCAGCAGCACAGCCCTTGCCAACATCACCATAACCGCAGACAACTGCAACCTTGCCAGCGA
TCATAACATCGGTGGCTCTCATCAAACCATCAGGGAGGGAGTGGCGGCAACCATACA