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Detailed information on CNT30669992


BLAST search results

BLAST vs Swiss-Prot:
sp|P00228|FER_WHEAT, E-value = 8e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193051Triticum dicoccoidesSecale cereale74.8870.2394.44486forward
CNT30308049Triticum dicoccoidesTriticum aestivum73.6572.189.33478forward
CNT30226363Triticum dicoccoidesHordeum vulgare49.4667.4490.65321forward
CNT30256669Triticum dicoccoidesAvena sativa36.0628.8293.16234forward
CNT30683360Triticum dicoccoidesTriticum urartu75.9681.4990.67493forward

Expression of CNT30669992

Peptides detected in this lncRNA

>peptide 1 (64 aa)
TPQPSGFISVRRVTYKVHASITAVVYLTVQKGCNSKTLLLEQTMHRAIHSSTNNSVYLAMSVHA*

Sequence

>CNT30669992
ACGCCTCAGCCATCAGGATTCATTTCAGTACGTCGAGTTACGTACAAGGTACACGCTAGTATTACGGCAGTAGTATATCTTACGGTACAAAAAGGTTGTA
ATTCGAAGACATTATTACTTGAGCAAACCATGCATCGAGCAATTCATTCGAGCACAAACAATTCGGTGTATCTGGCAATGTCCGTGCATGCATGATACGA
GATAATATGAAATCAGCTCGATCCTCTTGCAAAGAGAGATAGGTAAAGCAGCTTATGCGGTGAGCTCCTCCTCCTTGTGGGTCTCGATGACGATGTCGGA
CTTGGGGTAGGCGTGGCAGGTGAGCACCCACCCTGCCTCCATCTGGTCGATCCCCTCCTCCTCGGCCTGGTCGAGGATGTAGACGTCGTCGGGGACCTCC
AGCTCCACCTCGCCCTCGGGCGTCACCAGCTTCACCTTGTACGTCGCCTGGGCGCGGAGCCTGGCTCCCCGCACCTGCTTGGCGGCGGCGAGGCTGAGGG
CCGCGGGCGCGAGGGCCACGCGGGGCGCCGGTGGCGCCACGGCGCGCAGGGAGAAGGGCGCGCGGAGGCTCAGTGCGGCGGCCATTGCTAGCTACCTAGC
CGGAGCTAAGATGCTCTAGGTGTGGCTGAGGAGGTGGAGAGGATAGGCG