Detailed information on CNT30669889


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SDM1|CB121_HORVU, E-value = 1e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673697Triticum dicoccoidesSetaria viridis33.0719.8690.4884forward
CNT30304990Triticum dicoccoidesTriticum aestivum97.2498.4197.98247forward
CNT30567058Triticum dicoccoidesActinidia chinensis24.0216.9486.8961forward
CNT30589124Triticum dicoccoidesMusa acuminata59.0649.3487.33150forward
CNT30254921Triticum dicoccoidesAvena sativa91.3497.0793.1232forward
CNT30142107Triticum dicoccoidesLolium perenne39.7611.7692.08101forward
CNT307903Triticum dicoccoidesZea mays42.9128.3989.91109forward
CNT30346386Triticum dicoccoidesEragrostis tef27.9510.1795.7771forward
CNT30370487Triticum dicoccoidesOryza glumipatula28.357.5391.6772forward
CNT30102128Triticum dicoccoidesOryza rufipogon62.627.4688.05159forward
CNT30576871Triticum dicoccoidesOryza barthii65.3519.388.55166forward
CNT30580015Triticum dicoccoidesEchinochloa crusgalli85.4338.9690.32217forward
CNT30497042Triticum dicoccoidesDigitaria exilis48.0315.3590.16122forward
CNT30551236Triticum dicoccoidesOryza brachyantha59.0615.0892.67150forward

Expression of CNT30669889

Peptides detected in this lncRNA

>peptide 1 (83 aa)
PFLISLSLSSSNFAGSLEKPSGSKAMARNSIARMVGRLPQGTGLPRYVACPSGSAAHSCAFTQLPSPSASGTSTPGCTSSMPRT

>peptide 2 (83 aa)
VLDLLELELLELCGVLGEAERVEGDGQELDRQDGRQVAPGHRVAQVRRLPVGECRPLLRLHPVAQPQRLRHQYPRLHVVHATYG

Sequence

>CNT30669889
CCGTTCTTGATCTCCTTGAGCTTGAGCTCCTCGAACTTTGCGGGGTCCTTGGAGAAGCCGAGCGGGTCGAAGGCGATGGCCAGGAACTCGATCGCCAGGA
TGGTCGGCAGGTTGCCCCAGGGCACCGGGTTGCCCAGGTACGTCGCCTGCCCGTCGGGGAGTGCCGCCCACTCCTGCGCCTTCACCCAGTTGCCCAGCCC
CAGCGCCTCCGGCACCAGTACCCCAGGCTGCACGTCGTCCATGCCACGTACGGC