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Detailed information on CNT30669573


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 4e-158

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-127

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691368Triticum dicoccoidesOryza sativa70.6431.7689.18693forward
CNT30672296Triticum dicoccoidesSetaria viridis70.6485.3490.04693forward
CNT30528694Triticum dicoccoidesEucalyptus grandis70.2362.5288.68689forward
CNT30191758Triticum dicoccoidesSecale cereale92.0559.2990.14903forward
CNT30306465Triticum dicoccoidesTriticum aestivum92.5610096.92908forward
CNT30226205Triticum dicoccoidesHordeum vulgare68.7165.3190.8674forward
CNT30399278Triticum dicoccoidesTriticum turgidum66.3610098.46651forward
CNT30553813Triticum dicoccoidesOryza glaberrima70.1373.5887.94688forward
CNT30242438Triticum dicoccoidesAvena sativa70.9574.8492.67696forward
CNT30445203Triticum dicoccoidesSaccharum spontaneum70.6453.2789.03693forward
CNT30142093Triticum dicoccoidesLolium perenne70.6472.4992.78693forward
CNT30689164Triticum dicoccoidesTriticum urartu74.0192.692.01726forward
CNT30364163Triticum dicoccoidesSorghum bicolor70.7475.688.04694forward
CNT30595768Triticum dicoccoidesOryza meridionalis69.9349.8989.5686forward
CNT30110940Triticum dicoccoidesOryza longistaminata67.4824.4189.12662forward
CNT30148670Triticum dicoccoidesBrachypodium distachyon75.0377.6490.08736forward
CNT30100520Triticum dicoccoidesOryza rufipogon70.2369.4689.7689forward
CNT30576634Triticum dicoccoidesOryza barthii70.9564.8690.66696forward
CNT30583334Triticum dicoccoidesEchinochloa crusgalli70.8532.3389.64695forward
CNT30116770Triticum dicoccoidesOryza nivara67.5847.4288.99663forward
CNT30593897Triticum dicoccoidesEragrostis curvula69.9361.0990.23686forward
CNT30603673Triticum dicoccoidesOryza punctata70.5469.9788.29692forward

Expression of CNT30669573

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSDDSTSKVIVLPVRVLTKICMPPRRRRTRWSVDSFWML*

>peptide 2 (49 aa)
MEGGLLLDVVVSQGAAILKLLTSKDEALLVRGDALLVLDLGLHVVDGVR*

>peptide 3 (45 aa)
ASVPYKTYQMHQKEANKKTQITQQLQTQFRPHLFIKFTKAASQQL*

>peptide 4 (40 aa)
MVSEDSTSRVMVLPVRVFTKICMPPLSLSTRWRVDSFWML*

>peptide 5 (36 aa)
MPSLSWILALTLSMVSEDSTSRVMVLPVRVFTKICIC

>peptide 6 (29 aa)
MHHSTVETKKRPGQQTQAPLEAIPKTQDL*

Sequence

>CNT30669573
CGCATCAGTACCATATAAAACATATCAAATGCATCAGAAAGAAGCAAACAAGAAAACACAGATAACTCAGCAACTGCAGACACAATTCAGGCCTCACTTA
TTTATCAAGTTCACCAAAGCTGCTTCACAACAGCTTTAGTTTTCAAATACAACTGAACATAACGATGCATCACAGTACGGTAGAAACAAAGAAACGACCA
GGACAACAGACACAGGCACCATTGGAGGCCATACCGAAGACACAAGACCTGTGAACCCGCACAGAAGCCGCTCCATTGCCAGGTACTTACTGGCCACCAC
GGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTG
CTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTCACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTCAGG
GTCTTCACAAAGATCTGCATGCCACCCCTGAGCCTGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAA
GCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGATGACTCCAC
CTCCAAGGTGATAGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCATGCCTCCACGAAGGCGGAGGACAAGGTGGAGTGTGGACTCCTTCTGGATGTTG
TAGTCAGCCAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGA
CGTTGTCGATGGTGTCCGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATCTGTA