Detailed information on CNT30669215


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30304781Triticum dicoccoidesTriticum aestivum43.5171.3399.051050forward
CNT30362772Triticum dicoccoidesSorghum bicolor3.0331.7486.373reverse complement

Expression of CNT30669215

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MVTLVLTSPGRGACDLTVLGWCLVAGQGGELTV*

>peptide 2 (33 aa)
MIFVLCKPGRYFLFVLCKPGSFPNLNEIMLDVCV

>peptide 3 (41 aa)
MLMMPTCLAATVMHAPMKQAHMQGWPHVSSLAANIIYRIAI*

>peptide 4 (41 aa)
MNSMSLRVLFELIDATELIWRATYSFGCNIMLALLKSIMML*

>peptide 5 (91 aa)
MALRDSSVRSSGWGYAVTPGRRCPIPARRQPRANHGGLDQQGGVRAARRPVVSVGAGEFGSVRRDGGEPARRPMIGPWSRAKRRGSTPNPG*

>peptide 6 (43 aa)
MTRTSYKLPARLIQGEWPWSRAPQNQNRMASCGSWSMSHKREQ*

>peptide 7 (72 aa)
PHLTPLSLLSLSLSGTLALHSSLAAATSGGNRRPYPVRSGARSEIHLSLTHEKEIPAPFPRLICLSLDPLPS*

>peptide 8 (30 aa)
TPPNPSFPPLSLSLGNPSAPLLPCRRHLRR*

>peptide 9 (36 aa)
MASKAVAALLVTDELALPLRAVGDGSGEARSCAATA*

Sequence

>CNT30669215
ACCCCACCTAACCCCTCTTTCCCTCCTCTCTCTCTCTCTCTCGGGAACCCTAGCGCTCCACTCCTCCCTTGCCGCCGCCACCTCCGGCGGTAATCGAAGA
CCATATCCGGTGAGATCTGGCGCGCGCAGCGAGATCCATCTCTCTCTCACACACGAGAAGGAAATCCCCGCCCCATTCCCACGACTCATCTGCCTCTCCC
TCGATCCCCTTCCTTCCTGAGGACGCACGCGCCGCCGCCTCCCCGATCCCCTTCTCCCCTCGCCCCCCCACATCAAGCCGCCATCCACCTCGTCGCCTCC
CTGATTCATCCTCCTCCTCCTCCTATTCCCCTTATCAGATCCATCCATCCATTCATTTTTCCATCAGATCCACCTGACGCCATCGCATCCCCTTCTCGCT
TGCAGGGTTGCAGGCGATTCGATCTGGTCTGGGTCCATGGCGTCCAAGGCCGTGGCGGCGCTACTGGTGACGGACGAGCTGGCCCTGCCGCTCCGCGCGG
TGGGGGACGGCAGCGGGGAAGCACGCAGCTGCGCAGCGACCGCGTGAGGTTTCAGTGAGCGGCCGCATTGCTGCGGCAGGAGGACCAACGCGCGCTTCCG
GCGACGAGGCTCCATCGCGCGAACCAAGACACGGACTCGACAGGATGGCTCTGCGGGACTCCAGTGTCAGAAGCAGTGGTTGGGGCTACGCGGTGACCCC
AGGACGCCGCTGCCCGATTCCGGCGCGAAGGCAACCTCGCGCAAATCATGGCGGCCTTGACCAACAAGGAGGGGTCCGTGCCGCGCGGCGACCGGTGGTG
AGCGTCGGTGCTGGCGAGTTTGGGTCAGTACGTCGCGACGGCGGCGAGCCTGCTCGGCGGCCCATGATTGGACCTTGGAGCCGCGCGAAGAGAAGGGGAT
CCACTCCAAACCCAGGATAGGCAACATGGTGACTCTAGTGCTGACATCTCCCGGTCGCGGCGCGTGTGATCTGACTGTGTTGGGTTGGTGTCTAGTTGCA
GGACAAGGTGGCGAACTCACTGTTTGAGAAGACGTCGAACCAGTTAGGCATCGGCTGCGCGCTACCGCCCAAGAAGGACCTCCACCTGTTCGCCAGCGCC
GCATACTCAAGCAGCGCATCCGTGCCCAGCCGCGGTTGTTTTTGCCCATTTATGTTGTTGCTTTAGTAGCATTCTTTCCTTTCTTTTATGTAGCAGCAGA
GCACCACTCTTACTATGCACTTCGCTCCAGATTCTGCTACAATTACAAATTTAAAATGCATTCATGCATGAGCAGTGCATGTGTTGGCTGTCCATGAGAT
CATGAATAGTATGAGCCTTAGAGTCTTGTTCGAACTCATTGATGCAACAGAACTCATTTGGAGAGCTACCTACTCATTTGGATGTAATATCATGCTTGCT
CTTTTGAAATCGATAATGATGCTCTAAATGTTAGTCATATTTCCATTGTGGATTAGCTTCTGCCCCTCAAATGCTATTCACAAGTTGCATCCCTTGACTC
TGTATTCATGAGTAGTATACAACCTGAGATGTCCGATTGTATACAAACTGCACCTCGAAATTGATATTTTCTAGTCTGTTTCTTTGATTGTAAATGTTTC
TTCACTATAAATCTTCTATCTGTGATAAGTGCAACTAGAAGAATGTGTCCCATCTAAAATTATGTAATCCCTATTAGCTGAAACTTGAGCATTACAAAGT
TTCATTTCTAAGTCTAGTTTGTTGATAAGCCATCCTCCTCCTCTTTTGGGATTTATCGTGCATACACAACACTTCATGAAAATAAACTACATGCGATATA
CTCAAATAGCACTAGGGTCTGAGACTATTTTATGGTGTTGTGGATATACTTTGTGATTTACTATTATTGATCTGCGCTTTGGTGTCATATTATGGTATAA
TATATTTTGTTTTGGCTCTTTCTCTGTTGCCAGGAAAGTGGTGAGGAGATGTTGATGATGCCTACTTGCTTGGCTGCTACGGTGATGCATGCACCGATGA
AGCAAGCACACATGCAAGGCTGGCCCCATGTATCTTCCTTGGCTGCGAACATCATCTACAGGATAGCAATATGACCAGGACAAGCTACAAGCTCCCAGCG
CGTCTGATCCAGGGTGAATGGCCATGGTCACGAGCTCCTCAGAATCAAAATAGGATGGCAAGTTGTGGAAGCTGGAGCATGTCGCATAAGAGAGAGCAAT
GAAATCCATTGTACTGTTCCGTTAAAAAAAGTACATTGTGCTGTTATGATAGTAGCAGATTTGCCATCTTTCTTATTGTATAGTCCTGTGTAAGGAAATG
TATTCCTGAGATGATTTTTGTGTTATGTAAACCTGGGAGATATTTTCTTTTTGTGTTATGTAAACCTGGGAGTTTTCCTAATTTGAATGAAATAATGTTG
GATGTATGTGTGT