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Detailed information on CNT30669194


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 2e-98

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695986Triticum dicoccoidesOryza sativa58.8260.5887.3567forward

Expression of CNT30669194

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MCLLAGHKVGGEGPRVVVDGVGEVVSEVLKRTLTGDDGLHKVSKHGEHCKAAVLDLLHLELGKRLWIVS*

>peptide 2 (29 aa)
MAQRQWITSSSRFLAKVSGSAERPAVSHP*

>peptide 3 (43 aa)
MACTKYPNMENIARRPFLISFTLSSANASGSSARPRGSKLPPG*

>peptide 4 (39 aa)
MVTRPPPSAYEAPASLIAGEESAIVVEAAIAAGWNRASC*

Sequence

>CNT30669194
TTAGCAAACCCAAACAATTAATGTCCACTCGTATTCATATGGAAAATGAAAACCATGCATTTCTCATATAGACATTTCATGTTCCAGATGGGCGCTATTT
GTAAACATCTTTGATAGTGTACAACATCAACGATCAGATATTAATCATACATCCAGAGCACACATATACTCCTGAGAAGTCGATTTTCATGTGTTTACTT
GCCGGGCACAAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCTCAAGCGGACCCTTACCGGTGACGATG
GCCTGCACAAAGTATCCAAACATGGAGAACATTGCAAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCAAACGCCTCTGGATCGTCAGCTAGGC
CAAGGGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACGATCTCTCCGAGCGGGCCACCAGCAACGCGGTACCCCTCGACAGCGCCCATGAGCACGAC
CTGGCAAGCCCAGATGGCAAGGATGCTCTGAGCGTGGACCAAGCTAGGGTTACCGAGCCGGCCTTGAACCAGACGGCCTCGCCGAACTTGACGCCGTTGC
GGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATCACCTCGAGCTCGCGGTTCTTGGCGAAGGTCTCCGGGTC
GGCGGAGAGGCCCGCGGTGTCCCACCCGTAGTCGCCCGGGAACTCGCCGCTGAGGTAGAGCACGCGGTCGGGGCCGTACCAGGGGCTGTTGGAGGCGGCG
GCCTTGGGCGCGGCCTTGCGCATGGTGACGCGGCCGCCGCCGAGCGCGTACGAGGCTCCGGCGAGCTTGATCGCGGGGGAGGAGAGCGCCATTGTGGTGG
AGGCCGCCATTGCTGCCGGATGGAACAGAGCAAGCTGCTGATGTGCGGCTGCCGCTGCTACTGA