Detailed information on CNT30669182


BLAST search results

BLAST vs Swiss-Prot:
sp|P55307|CATA1_HORVU, E-value = 1e-160

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3070085Triticum dicoccoidesQuercus suber24.0627.6180180forward

Expression of CNT30669182

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MPTSSKRKVNMCRLSGWCEKKSTILQFSCMLVFGLGLKAWTMSGNFIPSRMKNTGILFPT

>peptide 2 (90 aa)
MELNKVSLSIPADQGVGVDTKTVHVPVVEWNANIIKEEGEHVQTLRVVREEVNYSPVLLHVGLWTWLESMDHVRELHPISDEKHRHIVPNK

>peptide 3 (34 aa)
MFLFRTIRPTGCSGMISSGQVLVTSRGSKSNLSS*

>peptide 4 (42 aa)
MMVVVVSTFRGIHRKHQVVWTETVPLGISIGKILVWSSLSSE*

>peptide 5 (42 aa)
MISINGLNEELPFWVIPSCNSISQVLCGMGVAGASNSNGFII*

Sequence

>CNT30669182
ATGAAATTCATTAAGCCACCATGATGGTTGTTGTGGTGAGCACATTTCGGGGCATTCACAGGAAGCATCAAGTAGTTTGGACCGAGACGGTGCCTTTGGG
TATCAGCATAGGAAAAATCCTTGTCTGGAGCAGCTTATCATCAGAGTAGTGGATTCCAGGGACAGTGACTGCTGGGCAGAAAGCAAGCTGTTCGTTTTCT
GCGAAGAAATTATCGATGTTCTTGTTCAGGACCATCCGTCCAACTGGTTGCAGTGGGATGATATCCTCTGGCCAGGTCTTGGTGACATCAAGAGGGTCAA
AGTCAAATCTATCCTCATGATCAGCATCAATGGTCTGAATGAAGAGCTTCCATTCTGGGTAATTCCCAGCTGCAATAGCATCAGTCAAGTCCTTTGTGGC
ATGGGTGTGGCAGGTGCCTCCAACAGTAACGGCTTCATCATCTAAGAGGCACTTGACACCACATGTAGGCTTCCAATGGAACTTAACAAGGTGAGCCTTT
CCATCCCTGCTGATCAAGGTGTAGGTGTTGACACCAAAACCGTCCATGTGCCTGTAGTTGAGTGGAATGCCAACATCATCAAAGAGGAAGGTGAACATGT
GCAGACTCTCCGGGTGGTGCGAGAAGAAGTCAACTATTCTCCAGTTCTCCTGCATGTTGGTCTTTGGACTTGGCTTGAAAGCATGGACCATGTCAGGGAA
CTTCATCCCATCTCGGATGAAAAACACAGGCATATTGTTCCCAACAAG