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Detailed information on CNT30668910


BLAST search results

BLAST vs Swiss-Prot:
sp|P55313|CATA2_WHEAT, E-value = 4e-60

BLAST vs NONCODE:
NONCQUT006985, E-value = 5e-42

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674192Triticum dicoccoidesSetaria viridis29.1836.2889.0282forward
CNT30317874Triticum dicoccoidesCorylus avellana79.7291.886.61224forward
CNT30373064Triticum dicoccoidesArabidopsis thaliana40.5719.9683.33114forward
CNT30405515Triticum dicoccoidesBeta vulgaris53.0210.9781.21149forward
CNT30526368Triticum dicoccoidesPhaseolus vulgaris43.427.6684.43122forward
CNT30708847Triticum dicoccoidesGlycine max64.7718.9481.87182forward
CNT30398713Triticum dicoccoidesTriticum turgidum96.8100100272forward
CNT30567579Triticum dicoccoidesActinidia chinensis55.5245.4882.69156forward
CNT30238041Triticum dicoccoidesBrassica oleracea44.4816.4580.8125forward
CNT30511681Triticum dicoccoidesSolanum lycopersicum76.1664.4682.24214forward
CNT30611006Triticum dicoccoidesArabis alpina40.5737.585.09114forward
CNT308572Triticum dicoccoidesZea mays88.6185.8689.96249forward
CNT30714890Triticum dicoccoidesMalus domestica golden77.2277.2284.33217forward
CNT30368346Triticum dicoccoidesSorghum bicolor88.6192.2290.36249forward
CNT30359648Triticum dicoccoidesLactuca sativa59.4342.8279.04167forward
CNT30119031Triticum dicoccoidesCitrus clementina97.1535.9782.05273forward

Expression of CNT30668910

Peptides detected in this lncRNA

>peptide 1 (92 aa)
LSGVELHCKTTWIPQGLRASTLMHNGREPDNNRGLNPRSPEEISASELRNIMSHLKEPLSTGSPCMNNTFRDTLPVKLCKLFNQMVILKKDRS

Sequence

>CNT30668910
CCTCTCTGGTGTAGAACTTCACTGCAAAACCACGTGGATCCCTCAAGGTCTCAGGGCTTCCACGCTCATGCACAACGGTAGAGAACCGGACAATAACCGG
GGTCTGAACCCCAGGAGCCCGGAGGAAATCAGCGCAAGTGAGCTGAGAAACATCATGAGTCACCTCAAAGAACCCCTTAGCACTGGCTCCCCGTGCATGA
ACAACACGTTCAGGGATACGCTCCCGGTCAAACTGTGCAAGCTTTTCAATCAGATGGTAATCCTCAAGAAGGATAGGTCCT