« Back to Triticum dicoccoides search


Detailed information on CNT30668803


BLAST search results

BLAST vs Swiss-Prot:
sp|P55307|CATA1_HORVU, E-value = 1e-163

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516671Triticum dicoccoidesJuglans regia39.6665.1781.97305forward
CNT30282683Triticum dicoccoidesChenopodium quinoa39.7933.2281.05306forward
CNT3021611Triticum dicoccoidesCitrullus lanatus39.6676.8381.64305forward
CNT30708944Triticum dicoccoidesGlycine max20.5527.7781.01158forward
CNT3046375Triticum dicoccoidesPrunus dulcis83.3691.8378.32641forward
CNT30168584Triticum dicoccoidesPistacia vera13.6538.7584.76105forward
CNT30638211Triticum dicoccoidesCapsicum annuum16.2522.483.2125forward
CNT3085325Triticum dicoccoidesVigna radiata45.949.9379.04353forward
CNT30313019Triticum dicoccoidesCamelina sativa34.0742.8181.68262forward
CNT3080335Triticum dicoccoidesBrassica juncea19.5126.4682150forward
CNT30263082Triticum dicoccoidesBrassica rapa4296.4279.57323forward
CNT30654455Triticum dicoccoidesRosa chinensis17.8229.9887.59137forward
CNT30624536Triticum dicoccoidesDaucus carota39.6621.7181.64305forward
CNT30688530Triticum dicoccoidesTriticum urartu32.1258.25100247forward
CNT30478285Triticum dicoccoidesArabidopsis halleri18.0840.1784.17139forward
CNT30154060Triticum dicoccoidesPrunus persica59.8245.8278.04460forward
CNT30704835Triticum dicoccoidesPrunus avium25.2364.8881.96194forward
CNT3022395Triticum dicoccoidesPopulus trichocarpa36.5468.3781.14281forward
CNT3050211Triticum dicoccoidesCucumis sativus24.455082.98188forward

Expression of CNT30668803

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MPTSSKRKVNMCRLSGWCEKKSTILQFSCMLVFGLGLKAWTMSGNFIPSRMKNTGILFPTRSKLP

>peptide 2 (42 aa)
MISINGLNEKLPFWVIPSCNSISQVLCGMGVAGASYSNGFII*

>peptide 3 (42 aa)
MMVVVVSTFRGIHRKHQVVWTETVPLGISIGKILVWSSLSSE*

>peptide 4 (34 aa)
MFLFRTIRPTGCSGMISSGQVLVTSRGSKSNLSS*

Sequence

>CNT30668803
CCTGTGCATGAAATTCATTAAGCCACCATGATGGTTGTTGTGGTGAGCACATTTCGGGGCATTCACAGGAAGCATCAAGTAGTTTGGACCGAGACGGTGC
CTTTGGGTATCAGCATAGGAAAAATCCTTGTCTGGAGCAGCTTATCATCAGAGTAGTGGATTCCAGGGACAGTGACTGCTGGGCAGAAAGCAAGCTGTTC
GTTTTCTGCGAAGAAATTATCGATGTTCTTGTTCAGGACCATCCGTCCAACTGGTTGCAGTGGGATGATATCCTCTGGCCAGGTCTTGGTGACATCAAGA
GGGTCAAAGTCAAATTTATCCTCATGATCAGCATCAATGGTCTGAATGAAAAGCTTCCATTCTGGGTAATTCCCAGCTGCAATAGCATCAGTCAGGTCCT
TTGTGGCATGGGTGTGGCAGGTGCCTCCTACAGTAACGGCTTCATCATCTAAGAGGCACTTCACACCACACGTAGGCTTCCAATGGAACTTAACAAGGTG
CGCCTTTCCATCCCTGCTGATTAAGGTGTAGGTGTTGACACCAAAACCGTCCATGTGCCTGTAGTTGAGTGGAATGCCAACATCATCAAAGAGGAAGGTG
AACATGTGCAGACTCTCCGGGTGGTGCGAGAAGAAGTCAACTATTCTCCAGTTCTCCTGCATGTTGGTCTTTGGACTTGGCTTGAAAGCATGGACCATGT
CAGGGAACTTCATCCCATCTCGGATGAAAAACACAGGCATATTGTTCCCAACAAGGTCAAAGTTACCCT