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Detailed information on CNT30668721


BLAST search results

BLAST vs Swiss-Prot:
sp|P06528|ATPF_WHEAT, E-value = 1e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678565Triticum dicoccoidesSetaria viridis69.7227.3496.02251forward
CNT30222903Triticum dicoccoidesHordeum vulgare55.8370.5397.51201forward
CNT30511193Triticum dicoccoidesSolanum lycopersicum64.7213.1586.27233forward
CNT30232563Triticum dicoccoidesAnanas comosus46.114.8592.17166forward
CNT3057337Triticum dicoccoidesAmborella trichopoda43.064.1683.23155forward

Expression of CNT30668721

Peptides detected in this lncRNA

>peptide 1 (29 aa)
PLLVRLSVIKSELFRVAQWSLYAILLNFE*

>peptide 2 (69 aa)
ASSSTFCNQIRAFSSCSMVPLRNSSEFRIVLKILCFRLSNKSFNTPFPKKSKHQSLQLDLLDLLLKYRY*

Sequence

>CNT30668721
CCGCTTCTAGTTCGACTTTCTGTAATCAAATCCGAGCTTTTTCGAGTTGCTCAATGGTCCCTCTACGCAATTCTTCTGAATTTCGAATAGTACTCAAGAT
CCTCTGTTTTCGATTATCTAATAAATCTTTTAACACTCCCTTTCCAAAAAAATCAAAACACCAATCACTACAGTTAGATTTATTAGATTTGTTGCTAAAA
TATCGGTATTAAGCCCGAAACTGCCAGCGGATGGCCAGTGAGCTAGAAAAACGAAAGAATGGGTTACATTTTTCATATGCTCTCCTCTTATAGATAGGAC
GAACAAAGAACAAAGTTTTTCGATCACTTACTTCGCTCGCCCTTTTTTGATCGATTTTTT