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Detailed information on CNT30668444


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 6e-88

BLAST vs NONCODE:
NONMEST001181, E-value = 9e-83

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307860Triticum dicoccoidesTriticum aestivum93.5384.5594.16651forward
CNT30397916Triticum dicoccoidesTriticum turgidum65.9530.2698.04459forward
CNT30242408Triticum dicoccoidesAvena sativa67.9664.0194.29473forward
CNT3067718Triticum dicoccoidesLeersia perrieri69.8360.4591.56486forward
CNT30688478Triticum dicoccoidesTriticum urartu100.4337.6698.71699forward
CNT30576670Triticum dicoccoidesOryza barthii70.2658.4292.43489forward
CNT30583297Triticum dicoccoidesEchinochloa crusgalli72.726.3391.9506forward

Expression of CNT30668444

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICK

>peptide 2 (38 aa)
QTILWIEFRAHLILSSSKLLHTSRSLQIQTITLHHSTV*

>peptide 3 (53 aa)
MPSLSWILAFTLSMVSEDSTSRVMVLPVRVLTKICIPPRSLSTKWRVDSFWML*

Sequence

>CNT30668444
GACAAACAATATTATGGATTGAATTCAGGGCTCACTTAATATTAAGTTCATCAAAGCTGCTGCACACCAGCAGAAGTTTGCAGATACAAACGATAACACT
GCATCATAGTACGGTATAGAAACAAAGACAGTTCAGGCAACGACAGACATAGACCAGACTCCTTAAGGACACCGAAGACGAGACTTGTGAACCCAGAGAC
AAAAGCAGCTCCATGGCCAGGAGCTTACTGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCCGCCAAGGGTGCG
GCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCT
GAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCACGGAGCCTGAGCACCAAGTGGAGAGTGGACTCCT
TCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGAT
CTTTGCCTTGACATTGTCAATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATA