Detailed information on CNT30668255


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 3e-151

BLAST vs NONCODE:
NONBNAT002216, E-value = 3e-68

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534338Triticum dicoccoidesEucalyptus grandis60.3952.6285.67593forward
CNT30141287Triticum dicoccoidesLolium perenne63.7561.5591.21626forward
CNT30103422Triticum dicoccoidesOryza rufipogon60.6945.9589.09596forward
CNT30604592Triticum dicoccoidesOryza punctata63.7562.7989.46626forward

Expression of CNT30668255

Peptides detected in this lncRNA

>peptide 1 (29 aa)
PLVFIWKMKTMHFSYRHFMFQMGAICKHL*

>peptide 2 (39 aa)
MVTRPPPSAYEAPASLIAGEESAIVVEAAIAAGWNRASC*

>peptide 3 (43 aa)
MACTKYPNMENIARRPFLISFTLSSANASGSSARPRGSKLPPG*

>peptide 4 (29 aa)
MAQRQWITSSSRFLAKVSGSAERPAVSHP*

>peptide 5 (69 aa)
MCLLAGHKVGGEGPRVVVDGVGEVVSEVLKRTLTGDDGLHKVSKHGEHCKAAVLDLLHLELGKRLWIVS*

Sequence

>CNT30668255
GTCCACTCGTATTCATATGGAAAATGAAAACCATGCATTTCTCATATAGACATTTCATGTTCCAGATGGGCGCTATTTGTAAACATCTTTGATAGTGTAC
AACATCAACGATCAGATATTAATCATACATCCAGAGCACACATATACTCCTGAGAAGTCGATTTTCATGTGTTTACTTGCCGGGCACAAAGTTGGTGGCG
AAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCTCAAGCGGACCCTTACCGGTGACGATGGCCTGCACAAAGTATCCAAACA
TGGAGAACATTGCAAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCAAACGCCTCTGGATCGTCAGCTAGGCCAAGGGGGTCGAAGCTGCCACC
GGGGTAGAGTGGGTCGACGATCTCTCCGAGCGGGCCACCAGCAACGCGGTACCCCTCGACAGCGCCCATGAGCACGACCTGGCAAGCCCAGATGGCAAGG
ATGCTCTGAGCGTGGACCAAGCTAGGGTTACCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCAGACGGCCTCGCCGAACT
TGACGCCGTTGCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATCACCTCGAGCTCGCGGTTCTTGGCGAA
GGTCTCCGGGTCGGCGGAGAGGCCCGCGGTGTCCCACCCGTAGTCGCCCGGGAACTCGCCGCTGAGGTAGCTCGGGGGCTCGCCAGAGAGCGGGCCGAGG
CGGCGGCCTTGGGCGCGGCCTTGCGCATGGTGACGCGGCCGCCGCCGAGCGCGTACGAGGCTCCGGCGAGCTTGATCGCGGGGGAGGAGAGCGCCATTGT
GGTGGAGGCCGCCATTGCTGCCGGATGGAACAGAGCAAGCTGCTGATGTGCGGCTGCCGCTGCTACTGATGGCTGCGTGAGG