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Detailed information on CNT30668159


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT001340, E-value = 1e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Triticum dicoccoidesOryza sativa10027.8995.52714forward
CNT30677056Triticum dicoccoidesSetaria viridis85.7151.690.85612forward
CNT30536068Triticum dicoccoidesEucalyptus grandis66.2513.7391.33473reverse complement
CNT30616920Triticum dicoccoidesSesamum indicum48.3235.3187.54345reverse complement
CNT30730500Triticum dicoccoidesCorchorus capsularis70.0342.1291.8500forward
CNT30196411Triticum dicoccoidesPisum sativum67.9338.3490.1485forward
CNT30638683Triticum dicoccoidesCapsicum annuum59.181.7887.2422reverse complement
CNT30186247Triticum dicoccoidesSecale cereale10050.2196.22714forward
CNT30291213Triticum dicoccoidesTriticum aestivum10020.5596.08714forward
CNT30225309Triticum dicoccoidesHordeum vulgare93.9855.6893.14671forward
CNT30399645Triticum dicoccoidesTriticum turgidum10031.2296.22714forward
CNT30444225Triticum dicoccoidesAegilops tauschii10064.6796.08714forward
CNT30248027Triticum dicoccoidesAvena sativa59.843.8494.85427reverse complement
CNT30310298Triticum dicoccoidesCamelina sativa70.0332.7992.2500reverse complement
CNT30460907Triticum dicoccoidesSaccharum spontaneum10021.4395.8714forward
CNT30136065Triticum dicoccoidesLolium perenne80.1189.194.93572forward
CNT3018333Triticum dicoccoidesZea mays10025.0195.8714forward
CNT30609809Triticum dicoccoidesGossypium raimondii38.16486.4272forward
CNT30206222Triticum dicoccoidesHelianthus annuus70.0377.6491.2500forward
CNT30713553Triticum dicoccoidesMalus domestica golden70.1774.3391.22501forward
CNT30627950Triticum dicoccoidesDaucus carota50.784.1990.33362forward
CNT30684661Triticum dicoccoidesTriticum urartu10016.8796.36714forward
CNT30721122Triticum dicoccoidesTriticum spelta10086.8695.94714forward
CNT30364730Triticum dicoccoidesSorghum bicolor55.8870.3795.24399reverse complement
CNT30596725Triticum dicoccoidesOryza meridionalis100.1420.7295.66715forward
CNT30154922Triticum dicoccoidesPrunus persica70.0329.689.4500reverse complement
CNT30411255Triticum dicoccoidesPapaver somniferum70.0316.4790.6500reverse complement
CNT30705531Triticum dicoccoidesPrunus avium37.5495.7189.55268reverse complement
CNT30319706Triticum dicoccoidesAsparagus officinalis70.0317.492.2500forward
CNT30332807Triticum dicoccoidesDioscorea rotundata70.0330.2792.2500reverse complement
CNT30148090Triticum dicoccoidesBrachypodium distachyon87.3921.4895.99624reverse complement
CNT30102929Triticum dicoccoidesOryza rufipogon73.6734.5693.54526reverse complement
CNT30574740Triticum dicoccoidesOryza barthii32.7747.5697.44234forward
CNT30585638Triticum dicoccoidesEchinochloa crusgalli95.844.1995.61684reverse complement
CNT30604668Triticum dicoccoidesOryza punctata60.3698.1893.74431forward

Expression of CNT30668159

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MEGESGPKIRSKGIVDGQQFNIPVLPLVGREGRRRLG*

>peptide 2 (68 aa)
MNGAKRSAEAVGCQNASVGERSALEGSNSESGGRRSGSENVGLSNENIGENPMPRKPKVSFARFIHGG*

>peptide 3 (32 aa)
MSKCIGRGAFRLRGKQQRKRGSTKRKRECRLE*

>peptide 4 (35 aa)
MPRAEVRVPSVAMLKYEPRGLAISSPRDSYQALRR*

Sequence

>CNT30668159
GGGGTGCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTTAAAGAGTGCGTATTAGCTCACTAATCGAGTGCCCTTGCGCTGAAGATGAATGG
GGCTAAGCGATCTGCCGAAGCTGTGGGATGTCAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCAACAGCGAAAGCGGGGGTCGACGAAGC
GGAAGCGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGTTTCCTTCGCAAGGTTCATCCATGGAGGGTGAG
TCAGGGCCTAAGATCAGGTCGAAAGGCATAGTCGATGGACAACAGTTCAATATTCCTGTACTACCCCTTGTTGGTAGGGAGGGACGGAGGAGGTTAGGTT
AGCCGAGAAATGGTTATAGGTTTAAGGACACAAGGTGACCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAAAAATGCCTCGAGCCGAGGTCCGAGTACCA
AGTGTTGCAATGCTAAAGTATGAGCCCCGTGGACTAGCGATTTCTTCTCCACGAGACTCATACCAGGCGCTACGGCGCTGAAGTATGTAACTGATGCCAT
ACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCAAAACTGACACAGGTGGGTAGGTAGATAATACCTAGGGGCGCGAGACAACT
CTCTCTAAGGAACT