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Detailed information on CNT30667756


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 4e-102

BLAST vs NONCODE:
NONTPRT002153, E-value = 3e-76

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30143307Triticum dicoccoidesLolium perenne67.9962.9192.44463forward
CNT30722465Triticum dicoccoidesTriticum spelta96.4858.1998.33657forward

Expression of CNT30667756

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICIPPRRRRTR*

>peptide 2 (43 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVRVLTKICI

Sequence

>CNT30667756
ACTTGACCGTACTGCTATAGCAGCAACTGTTTAAACGAAACCAACACATCTCACAACTGTTTAAACGAAACCAACACATCTCACAACTGTTTAAACGAAA
CCAACACATCTCACAGGGACTCGATGGTCCATGAAACCAGACACGGTAGGACTTGACACAAACGAGACTTAACACTTCACACGAGCGACAGGGGCACCCA
CCAGAGTACTCAGGGCATTTACTGACCACCGCGGAGGCGGAGCACCAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCATCC
TCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCT
CAACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCATACCACCTCGGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGAT
GTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCC
TTGACATTGTCGATGGTATCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATC