Detailed information on CNT30667663


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30190004Triticum dicoccoidesSecale cereale52.9565.2289.34422forward

Expression of CNT30667663

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MRCVRARSVREPVRRLHRRHLHRLLPHGLGRQLLKWKMILLPSSFGFLSVVSLN*

>peptide 2 (63 aa)
SRRPATADPDHGLHSTASATSPSWPEIHSSSTLLSINLQIPPSATPTGETPSPPATSLPSSSD*

>peptide 3 (90 aa)
SPDDPPPPTPTTASTPPPAPPPLPGRRSTRAPPSSRLISKSRRRQPPPVKPHHHRRPPSLPLQIDGWVGTGRGGSAPAPTGASCYGGPRR*

>peptide 4 (93 aa)
MATADLRPPFLEAVAAANGGGDGGRRRGAVAAQRLAAGDELPDAVRACKKCSRASTSSSPSAPSSPPSSRLGPPASQVEDDPAAIKFRFLVSC*

>peptide 5 (45 aa)
MGGDGEGRICTRTHRSVLLRWPSPLMNSTTPISGHGDRGSPTPFS*

>peptide 6 (36 aa)
LPTTRHRRPRPRPPLHRQRHLPFLAGDPLELHPPLD*

Sequence

>CNT30667663
TCTCCCGACGACCCGCCACCGCCGACCCCGACCACGGCCTCCACTCCACCGCCAGCGCCACCTCCCCTTCCTGGCCGGAGATCCACTCGAGCTCCACCCT
CCTCTCGATTAATCTCCAAATCCCGCCGTCGGCAACCCCCACCGGTGAAACCCCATCACCACCGGCGACCTCCCTCCCTTCCTCTTCAGATTGACGGATG
GGTGGGGACGGGGAGGGGCGGATCTGCACCCGCACCCACCGGAGCGTCTTGCTACGGTGGCCCTCGCCGCTGATGAACTCCACGACGCCCATCTCCGGCC
ATGGCGACCGCGGATCTCCGACCCCCTTTTCTTGAGGCTGTCGCTGCTGCTAACGGTGGTGGAGACGGTGGTCGCCGACGCGGTGCTGTCGCTGCCCAAC
GTCTGGCGGCGGGCGACGAACTGCCCGATGCGGTGCGTGCGTGCAAGAAGTGTTCGAGAGCCAGTACGTCGTCTTCACCGTCGGCACCTTCATCGCCTCC
TTCCTCACGGCTTGGGCCGCCAGCTTCTCAAGTGGAAGATGATCCTGCTGCCATCAAGTTTCGGTTTCTTGTCAGTTGTTAGCTTGAATTAATACATGTA
CTTTTGGTTATGCAAATGTAGGTTCTGTTGTTAGATCTTGTAGTTAGTTGTAGATGGAGTTTCTGCTTGTTTGAAATCCCAAGGACTGCCTGGTAGTAGT
GTATCATAAGTAAGCTTTTAAAAGTATGGTTGATCGACTGGACGATATTCCATGTCTACTTTTCGTACAGTTCCACCCCTGATTTTAACATTGGCCG