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Detailed information on CNT30667649


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30585847Triticum dicoccoidesMusa acuminata22.5810.729070forward
CNT30713541Triticum dicoccoidesMalus domestica golden14.1920.4795.4544reverse complement
CNT30147990Triticum dicoccoidesBrachypodium distachyon62.5812.8194.85194reverse complement

Expression of CNT30667649

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MTHLLIYDRGIYSYSDCFLVRISTIRSNRLVIS*

>peptide 2 (31 aa)
IPPFIHIPLVLLHNLESLFFFREKIAVATTI*

Sequence

>CNT30667649
CATCCCTCCCTTTATCCACATCCCTTTAGTTTTGCTTCACAACCTAGAATCCCTTTTCTTTTTTAGAGAAAAAATTGCAGTTGCTACAACTATATGACAC
ATCTACTCATTTATGATAGAGGTATTTATTCATATAGTGACTGTTTCTTAGTTAGGATCTCGACAATACGAAGCAATAGGTTGGTTATTAGTTAATTTTC
TATAATTACTAAGTTTTTTTCTTAAAAAAAAGAAAAAAGAAAAAAATAATGAGTCACACACTAAGCATAGCAATTATATTAAATGATTTATCAATTTTCA
TTAAATCTTA