Detailed information on CNT30667627


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30392703Triticum dicoccoidesTriticum turgidum47.647.7785.11141forward
CNT30440859Triticum dicoccoidesAegilops tauschii40.8833.893.39121forward
CNT30250097Triticum dicoccoidesAvena sativa25.6811.3988.1676forward
CNT30447580Triticum dicoccoidesSaccharum spontaneum37.538.2885.59111reverse complement
CNT30142095Triticum dicoccoidesLolium perenne25.6837.8185.5376forward
CNT30687812Triticum dicoccoidesTriticum urartu40.8854.593.39121forward
CNT30149913Triticum dicoccoidesBrachypodium distachyon26.012.9189.6177forward
CNT30584472Triticum dicoccoidesEchinochloa crusgalli25.6812.0188.1676forward
CNT30498933Triticum dicoccoidesDigitaria exilis23.655.159070forward

Expression of CNT30667627

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MVGGPLSPAQYKEVGCGGTHHEVDRTPQHHRNTNPI*

>peptide 2 (39 aa)
VRLIFIPFEPNGSNGPLTRALIGGAQPIHGWWAPVASAI*

Sequence

>CNT30667627
GTTAGGTTGATCTTTATCCCGTTCGAACCCAACGGGTCGAACGGGCCCCTGACTCGCGCCCTGATCGGGGGCGCCCAACCAATCCATGGTTGGTGGGCCC
CTGTCGCCAGCGCAATATAAAGAGGTGGGGTGCGGGGGCACGCATCACGAGGTTGACCGTACACCACAACACCACCGAAACACCAATCCGATCTAGGGTT
TTGCGCTAGGCCGACGGGAAGCTCCGCCGCCACCACCTCGCCCACACTCCGCCATCACCATGGCCGGTGCTGGATCGAGTTCGTCCGCACCAGGAG