« Back to Triticum dicoccoides search


Detailed information on CNT30667543


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 8e-84

BLAST vs NONCODE:
NONSTUT000620, E-value = 2e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30303048Triticum dicoccoidesTriticum aestivum85.7199.8698.691379forward
CNT30397549Triticum dicoccoidesTriticum turgidum36.387.6996.92584forward
CNT30441445Triticum dicoccoidesAegilops tauschii30.6466.2692.9493forward
CNT30722589Triticum dicoccoidesTriticum spelta30.6466.892.9493forward

Expression of CNT30667543

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MRRCWSRGMSSLSWIFAFTLSMVSDDSTSRVMVLPVRVFTKICICKYKVNPE*

>peptide 2 (52 aa)
MRCYWSRGMPSLSWIFAFTLSMVSKDSTSNMMVLPVRVLTKICIPPRRRSTR*

>peptide 3 (29 aa)
MLKVGHNNLDRCNRNNNINFRVEPRQTAP*

Sequence

>CNT30667543
CGGGTTGTCAGATACAGCGTCAATACAGAGTTATACGCGGCTTAGCCCGTATTGCAGCGACCAGCCTCAAACATGGTACTGACTTGTAAAAAATCTAAAT
AGTGGTACTGATCCGTTACAACTGCAAGTGTGATACTTCCCTGCAATTAACTCAAGCACCAAGTGAAGGGTAGACTCCTTCTGGATAATGTAGTTCGCCA
GAGTGCGACCATCCTCAGGCTGCTTACCAGCAAAGATGAGATGCTACTGGTCTAGGGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGAT
GGTGTCCAAGGACTCCACCTCCAACATGATGGTCTTGCCTGTCAGGGTCTTGACGAAGATCTGCATACCACCACGAAGGCGGAGCACCAGGTGAAGGGTG
GACTCCTTCTGGATGTTGTAGTCAGCAAAGGTACAGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCAGGGGGATGTCCTCCTTGT
CCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATTTGTAA
ATACAAAGTAAACCCAGAGTAAGGAGCGGTTGAAAGGAAACATGCAAACATAAATAATACAGGTACGGAGAGAAATGAAATCCTAGCTACATATAAACGA
AAATCTCAATATGAACCTAGTAAAAATCCCAATATATCAGCACAATCTTAAGCCTGGTGAGAAGGATATATACTCTAAATCCTAGCAAAATCTATGCTCA
AAGTGGGACACAACAATCTGGACAGGTGCAACAGAAATAATAACATAAATTTCAGAGTAGAACCAAGGCAAACTGCACCATGAGAAAGCTAGTAGTAAAC
AAATCCAGAATCAAGAACCTAAAAGAACCCAGCATATAAACTTGGCAACAATCCTATAGAACCAACCTATCCAGCAAAACGTAACAGATTAAACTAGTAG
CAAAACCTAGCAAAAGTTAACAAATCTATCAGCACAATCTTTGGCCTGCTGATAAGGCTATATAGTCTAACTCCCAGCAGATCTATCTGAAAAAGTGTAT
ATGAATCAACAATAATAACACGAATTTCAGACTAGAACCGACAGGCAACTACAAGGGTGAACCATGAATAAGTAGGGTAAATAAATTCAGAATCTGGAGC
CTAGCGGAATCAACCAGCTAGGCACACCTAGATGAAGCGAGTCAACAAAATCGATGCATAGGACTACGACACGCAACCAAACGAGCGAAATCAATCAACC
AGCCACGCACGCCTGATAGGGTGGGCCGAATCGACACCAATCGGACAATCGACGAGTGATCGAATCGACAGCAATCGATCAACAAGCAATAGCGCAGATC
TACTGCAGACGACGGCTGCAAAGGACGATTAACAGAATAGAAATTACCTCGGGGAGGAGGACGAGAAAGCCCTGGCTTCGATCGGTCGGAGATTCTTCGG
TGGGGATTGGGTCGGCTTTGCGGATAGGATTGGAGAGGGGGGTGGGGATTTTATAGTCGAGGAGGCCGGGTCAGATGGGGAGGGAAGAGGAGTCCCGTGA
GGATACGGC